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Genome Research - ResearchHub

Journal

Genome Research

1088-9051 · Cold Spring Harbor Laboratory

20 verified public works

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Corrigendum: Profiling the long noncoding RNA interaction network in the regulatory elements of target genes by chromatin in situ reverse transcription sequencing

2026 · 0 citations

Scaling coalescent-based species tree inference to 100,000 taxa with STELAR-X

2026 · 0 citations

Optical genome mapping identifies clinically relevant somatic structural variation in epilepsy-affected brain tissue

2026 · 0 citations

Meso-scale spatial analysis of papilloma formation and clonal expansion in cancerized skin

2026 · 0 citations

Fast and accurate construction of multiple sequence alignments from protein language embeddings with ARIES

2026 · 0 citations

CircExor enables interpretable prediction of circRNA localization into extracellular vesicles

2026 · 0 citations

Unifying multimodal single-cell data with a mixture-of-experts β-variational autoencoder framework

2026 · 0 citations

Dual-contrastive learning for spatial domain identification in spatial transcriptomics with STAMGC

2026 · 0 citations

T2T genomes of Caenorhabditis nigoni and Caenorhabditis briggsae reveal divergence in satellite DNA abundance

2026 · 0 citations

Resolving missing human polymorphic inversions and other complex variants from ultralong read data

2026 · 0 citations

Robust annotation and discovery of novel cell types in single-cell ATAC-seq data through cross-modal reference alignment

2026 · 0 citations

Identification of differential topologically associating domains from low sequencing depth and pseudobulk chromatin contact maps

2026 · 0 citations

A network of steroid receptor transcription factors regulates ovarian chromatin remodeling in the transition to ovulation

2026 · 0 citations

Accurate reconstruction of spatial cell-type maps and characterization of domain-specific functions based on a gene-aware heterogeneous network

2026 · 0 citations

Bayesian inference of lineage trees by joint analysis of single-cell multimodal lineage-tracing data with BiLinT

2026 · 0 citations

Nuclear mitochondrial sequences in great ape telomere-to-telomere genomes

2026 · 0 citations

Characterizing intra- and intertumor heterogeneity in ovarian high-grade serous carcinoma subtypes using single-cell and spatial transcriptomics

2026 · 0 citations

Massively parallel characterization of adolescent idiopathic scoliosis risk variants

2026 · 0 citations

Fetal signatures in the 3D genome of iPSC-derived neurons and their implications for disease modeling

2026 · 0 citations

Moderated designs can balance between batch-effect mitigation and cell loss due to hashtag-assisted pooling in single-cell experiments

2026 · 0 citations

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