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References from Genomic Detection of Multidrug‐Resistant H58 ST1 Salmonella Typhi in a South African Urban Waterway Reveals Epidemiological Links With Clinical Isolates. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1371/journal.pntd.0013067
10.1371/journal.pntd.0013067 · External reference
10.1371/journal.pntd.0012373
10.1371/journal.pntd.0012373 · External reference
10.12688/wellcomeopenres.16291.2
10.12688/wellcomeopenres.16291.2 · External reference
10.36380/jwpr.2020.27
10.36380/jwpr.2020.27 · External reference
FastQC: A Quality Control Tool for High‐Throughput Sequence Data
2010 · External reference
10.1038/s41467-021-23091-2
10.1038/s41467-021-23091-2 · External reference
10.1016/j.ijfoodmicro.2024.110890
10.1016/j.ijfoodmicro.2024.110890 · External reference
10.1089/cmb.2012.0021
10.1089/cmb.2012.0021 · External reference
10.3390/microorganisms13010180
10.3390/microorganisms13010180 · External reference
Resfinder 4.0 for Predictions of Phenotypes From Genotypes
10.1093/jac/dkaa345 · 2020 · External reference
10.1186/1471-2105-10-421
10.1186/1471-2105-10-421 · External reference
10.1128/aac.02412-14
10.1128/aac.02412-14 · External reference
10.1093/cid/ciz637
10.1093/cid/ciz637 · External reference
10.1016/j.ijfoodmicro.2023.110319
10.1016/j.ijfoodmicro.2023.110319 · External reference
10.1128/cmr.00002-15
10.1128/cmr.00002-15 · External reference
10.3389/fmicb.2020.521146
10.3389/fmicb.2020.521146 · External reference
10.1016/j.fm.2021.103758
10.1016/j.fm.2021.103758 · External reference
10.1128/aem.01566-25
10.1128/aem.01566-25 · External reference
10.1093/infdis/jiab414
10.1093/infdis/jiab414 · External reference
10.3389/fpubh.2023.1151805
10.3389/fpubh.2023.1151805 · External reference
10.1093/nar/gkad326
10.1093/nar/gkad326 · External reference
10.1093/bioinformatics/btt086
10.1093/bioinformatics/btt086 · External reference
10.1016/j.ijfoodmicro.2025.111097
10.1016/j.ijfoodmicro.2025.111097 · External reference
10.1128/mmbr.00119-22
10.1128/mmbr.00119-22 · External reference
10.1371/journal.pntd.0001245
10.1371/journal.pntd.0001245 · External reference
10.1099/mgen.0.000704
10.1099/mgen.0.000704 · External reference
Unresolved reference
External reference
10.12688/wellcomeopenres.14826.1
10.12688/wellcomeopenres.14826.1 · External reference
10.1371/journal.pone.0104984
10.1371/journal.pone.0104984 · External reference
10.4269/ajtmh.18-0182
10.4269/ajtmh.18-0182 · External reference
Unresolved reference
2012 · External reference
Unresolved reference
External reference
10.1128/jcm.06094-11
10.1128/jcm.06094-11 · External reference
10.1093/nar/gkae268
10.1093/nar/gkae268 · External reference
10.1016/j.scitotenv.2011.12.069
10.1016/j.scitotenv.2011.12.069 · External reference
10.1186/s12879-025-11223-8
10.1186/s12879-025-11223-8 · External reference
10.7717/peerj.6995
10.7717/peerj.6995 · External reference
10.3201/eid2611.201676
10.3201/eid2611.201676 · External reference
10.1016/s2214-109x(17)30022-0
10.1016/s2214-109x(17)30022-0 · External reference
10.1093/cid/ciaa487
10.1093/cid/ciaa487 · External reference
10.3389/fmicb.2020.562181
10.3389/fmicb.2020.562181 · External reference
10.1038/s41572-023-00480-z
10.1038/s41572-023-00480-z · External reference
10.1016/j.heliyon.2024.e40523
10.1016/j.heliyon.2024.e40523 · External reference
10.3389/fcimb.2024.1468866
10.3389/fcimb.2024.1468866 · External reference
Unresolved reference
External reference
10.1038/s41467-018-07370-z
10.1038/s41467-018-07370-z · External reference
10.1093/cid/ciz1112
10.1093/cid/ciz1112 · External reference
10.3390/pathogens14100967
10.3390/pathogens14100967 · External reference
10.1128/msystems.00009-16
10.1128/msystems.00009-16 · External reference
Unresolved reference
External reference
Unresolved reference
2024 · External reference
10.1093/ofid/ofae118
10.1093/ofid/ofae118 · External reference
10.1099/mgen.0.001044
10.1099/mgen.0.001044 · External reference
10.4102/ajlm.v14i1.2900
10.4102/ajlm.v14i1.2900 · External reference
10.1016/s1473-3099(18)30685-6
10.1016/s1473-3099(18)30685-6 · External reference
10.1002/mlf2.12114
10.1002/mlf2.12114 · External reference
10.1093/nar/gkw569
10.1093/nar/gkw569 · External reference
Unresolved reference
External reference
10.1093/infdis/jiad427
10.1093/infdis/jiad427 · External reference
10.1371/journal.pntd.0012518
10.1371/journal.pntd.0012518 · External reference
10.1017/s095026889800889x
10.1017/s095026889800889x · External reference
10.1093/ismejo/wrad032
10.1093/ismejo/wrad032 · External reference
10.1038/ng.3281
10.1038/ng.3281 · External reference
10.1186/s13059-019-1891-0
10.1186/s13059-019-1891-0 · External reference
10.1371/journal.pone.0147101
10.1371/journal.pone.0147101 · External reference
10.1128/jcm.00323-15
10.1128/jcm.00323-15 · External reference
10.3389/fcimb.2025.1527765
10.3389/fcimb.2025.1527765 · External reference
10.1101/gr.232397.117
10.1101/gr.232397.117 · External reference
