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References from Strain‐specific monitoring of Bacillus amyloliquefaciens AH2 in strawberry fields using a specific molecular marker. Local targets link to admitted publications; unresolved targets remain external evidence.
Bacteria as biological control agents of plant diseases
10.3390/microorganisms10091759 · 2022 · External reference
Plant‐associated bacillus and pseudomonas antimicrobial activities in plant disease suppression via biological control mechanisms ‐ a review
10.1016/j.pmpp.2021.101754 · 2022 · External reference
Biological control of plant pathogens by bacillus species
10.1016/j.jbiotec.2018.07.044 · 2018 · External reference
Bacilli as sources of agrobiotechnology: recent advances and future directions
10.1080/17518253.2021.1905080 · 2021 · External reference
Bacillus amyloliquefaciens as an excellent agent for biofertilizer and biocontrol in agriculture: an overview for its mechanisms
10.1016/j.micres.2022.127016 · 2022 · External reference
Bacillus amyloliquefaciens GB03 augmented tall fescue growth by regulating phytohormone and nutrient homeostasis under nitrogen deficiency
10.3389/fpls.2022.979883 · 2022 · External reference
Peer review of the pesticide risk assessment of the active substance bacillus amyloliquefaciens strain AH2
2020 · External reference
Bacillus velezensis: a valuable member of bioactive molecules within plant microbiomes
10.3390/molecules24061046 · 2019 · External reference
Unresolved reference
2014 · External reference
Design of bacterial strain‐specific qPCR assays using NGS data and publicly available resources and its application to track biocontrol strains
10.3389/fmicb.2020.00208 · 2020 · External reference
Use of quantitative PCR detection methods to study biocontrol agents and phytopathogenic fungi and oomycetes in environmental samples
10.1111/jph.12147 · 2014 · External reference
Quantification of Cadophora luteo‐olivacea from grapevine nursery stock and vineyard soil using droplet digital PCR
10.1094/pdis-09-19-2035-re · 2020 · External reference
A TaqMan‐based qPCR assay for quantitative detection of the biocontrol agents Bacillus subtilis strain QST713 and bacillus amyloliquefaciens subsp. plantarum strain D747
10.1007/s10526-015-9701-4 · 2016 · External reference
Microbiology of the Phyllosphere
10.1128/aem.69.4.1875-1883.2003 · 2003 · External reference
From the lab to the farm: an industrial perspective of plant beneficial microorganisms
10.3389/fpls.2016.01110 · 2016 · External reference
SPAdes: a new genome assembly algorithm and its applications to single‐cell sequencing
10.1089/cmb.2012.0021 · 2012 · External reference
MeDuSa: a multi‐draft based scaffolder
10.1093/bioinformatics/btv171 · 2015 · External reference
Prokka: Rapid Prokaryotic Genome Annotation
10.1093/bioinformatics/btu153 · 2014 · External reference
Versatile genome assembly evaluation with QUAST‐LG
10.1093/bioinformatics/bty266 · 2018 · External reference
Genetic diversity in Sargasso Sea bacterioplankton
10.1038/345060a0 · 1990 · External reference
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position‐specific gap penalties and weight matrix choice
10.1093/nar/22.22.4673 · 1994 · External reference
MEGA11: molecular evolutionary genetics analysis version 11
10.1093/molbev/msab120 · 2021 · External reference
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
10.1007/bf01731581 · 1980 · External reference
The neighbor‐joining method: a new method for reconstructing phylogenetic trees
1987 · External reference
Primer3Plus, an enhanced web interface to Primer3
10.1093/nar/gkm306 · 2007 · External reference
Development of real‐time PCR (TaqMan®) assays for the detection and quantification of Botrytis cinerea in planta
10.1016/j.plaphy.2005.07.003 · 2005 · External reference
Analysis of relative gene expression data using real‐time quantitative PCR and the 2‐ΔΔCT method
10.1006/meth.2001.1262 · 2001 · External reference
Type I restriction systems: sophisticated molecular machines (a legacy of Bertani and Weigle)
10.1128/mmbr.64.2.412-434.2000 · 2000 · External reference
A greedy algorithm for aligning DNA sequences
10.1089/10665270050081478 · 2000 · External reference
Analyzing real‐time PCR data by the comparative CT method
10.1038/nprot.2008.73 · 2008 · External reference
Technique evolutions for microorganism detection in complex samples: a review
10.3390/app12125892 · 2022 · External reference
RNA nucleotide methylation
10.1002/wrna.79 · 2011 · External reference
Architectures, mechanisms and molecular evolution of natural product methyltransferases
10.1039/c2np20029e · 2012 · External reference
Structural analysis of a putative SAM‐dependent methyltransferase, YtqB, from Bacillus subtilis
10.1016/j.bbrc.2014.03.026 · 2014 · External reference
16S rRNA gene sequencing for bacterial identification in the diagnostic laboratory: pluses, perils, and pitfalls
10.1128/jcm.01228-07 · 2007 · External reference
Use of 16S rRNA and rpoB genes as molecular markers for microbial ecology studies
10.1128/aem.01177-06 · 2007 · External reference
Two rapid and sensitive methods based on TaqMan qPCR and droplet digital PCR assay for quantitative detection of Bacillus subtilis in rhizosphere
10.1111/jam.14481 · 2020 · External reference
How to identify and quantify the members of the bacillus genus?
10.1111/1462-2920.16593 · 2024 · External reference
Throughput screening of Bacillus subtilis strains that abundantly secrete surfactin in vitro identifies effective probiotic candidates
10.1371/journal.pone.0277412 · 2022 · External reference
Development of a novel PCR assay based on the gyrase B gene for species identification of bacillus licheniformis
10.1016/j.mcp.2012.05.001 · 2012 · External reference
Structure and function of type II DNA topoisomerases
10.1042/bj3030681 · 1994 · External reference
Bacterial diversity based on type II DNA topoisomerase genes
10.1146/annurev.genet.30.1.79 · 1996 · External reference
Dead or alive: molecular assessment of microbial viability
10.1128/aem.01763-14 · 2014 · External reference
Dispersal of Bacillus subtilis and its effect on strawberry phyllosphere microbiota under open field and protection conditions
10.1038/srep22611 · 2016 · External reference
Leaf microbiota of strawberries as affected by biological control agents
10.1094/phyto-01-13-0014-r · 2013 · External reference
10.1007/s10123-003-0144-x · 2003 · Admitted local publication