Research graph
References from Discovery of the TGCB microprotein translated from the lncRNA CHASERR. Local targets link to admitted publications; unresolved targets remain external evidence.
Regulation of CHD2 expression by the Chaserr long noncoding RNA gene is essential for viability
10.1038/s41467-019-13075-8 · 2019 · External reference
Neurodevelopmental disorder caused by deletion of CHASERR , a lncRNA gene
10.1056/nejmoa2400718 · 2024 · External reference
The genotype-tissue expression (GTEx) project
10.1038/ng.2653 · 2013 · External reference
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CPC2: a fast and accurate coding potential calculator based on sequence intrinsic features
10.1093/nar/gkx428 · 2017 · External reference
CPAT: coding-potential assessment tool using an alignment-free logistic regression model
10.1093/nar/gkt006 · 2013 · External reference
IRSOM2: a web server for predicting bifunctional RNAs
10.1093/nar/gkad381 · 2023 · External reference
RNAsamba: neural network-based assessment of the protein-coding potential of RNA sequences
2020 · External reference
In-depth characterization and identification of translatable lncRNAs
10.1016/j.compbiomed.2023.107243 · 2023 · External reference
GWIPS-viz: development of a ribo-seq genome browser
10.1093/nar/gkt1035 · 2014 · External reference
GWIPS-viz: 2018 update
10.1093/nar/gkx790 · 2018 · External reference
Positional proteomics reveals differences in -terminal proteoform stability
10.15252/msb.20156662 · 2016 · External reference
eIF1 modulates the recognition of suboptimal translation initiation sites and steers gene expression via uORFs
10.1093/nar/gkx469 · 2017 · External reference
PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration
10.1093/nar/gku1283 · 2015 · External reference
Pervasive functional translation of noncanonical human open reading frames
10.1126/science.aay0262 · 2020 · External reference
OpenProt 2.0 builds a path to the functional characterization of alternative proteins
10.1093/nar/gkad1050 · 2024 · External reference
Highly accurate protein structure prediction with AlphaFold
10.1038/s41586-021-03819-2 · 2021 · External reference
Structure-based protein function prediction using graph convolutional networks
10.1038/s41467-021-23303-9 · 2021 · External reference
DeepGO: predicting protein functions from sequence and interactions using a deep ontology-aware classifier
10.1093/bioinformatics/btx624 · 2018 · External reference
ProFunc: a server for predicting protein function from 3D structure
10.1093/nar/gki414 · 2005 · External reference
Large-scale predicting protein functions through heterogeneous feature fusion
10.1093/bib/bbad243 · 2023 · External reference
Long non-coding RNAs associated with ribosomes in human adipose-derived stem cells: from RNAs to microproteins
10.3390/biom11111673 · 2021 · External reference
The translation of non-canonical open reading frames controls mucosal immunity
10.1038/s41586-018-0794-7 · 2018 · External reference
The translational landscape of the human heart
10.1016/j.cell.2019.05.010 · 2019 · External reference
Microproteins in skeletal muscle: hidden keys in muscle physiology
10.1002/jcsm.12866 · 2022 · External reference
Unresolved reference
2025 · External reference
Noncoding translation mitigation
10.1038/s41586-023-05946-4 · 2023 · External reference
Unveiling polysomal long non-coding RNA expression on the first day of adipogenesis and osteogenesis in human adipose-derived
2024 · External reference
Practical Applications of language models in protein sorting prediction: signalp 6.0, DeepLoc 2.1, and DeepLocPro 1.0
2025 · External reference
The footprint of CHASERR as a potential culprit in alzheimer’s disease patients: an in-silico-experimental study
10.2174/0115672050381537250422075255 · 2025 · External reference
m6A-Mediated upregulation of lncRNA CHASERR promotes the progression of glioma by modulating the miR-6893-3p/TRIM14 axis
10.1007/s12035-023-03911-w · 2024 · External reference
Long non-coding RNA 1810026B05Rik mediates cerebral Ischemia/Reperfusion-Induced neuronal injury through NF-κB Pathway activation
10.3390/ijms26199756 · 2025 · External reference
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