References

Marine viruses — major players in the global ecosystem

10.1038/nrmicro1750 · 2007 · External reference

Are viruses driving microbial diversification and diversity?

10.1046/j.1462-2920.2003.00539.x · 2004 · External reference

Virioplankton: viruses in aquatic ecosystems

10.1128/mmbr.64.1.69-114.2000 · 2000 · External reference

Phage-host interaction: an ecological perspective

10.1128/jb.186.12.3677-3686.2004 · 2004 · External reference

Elements of a theory for the mechanisms controlling abundance, diversity, and biogeochemical role of lytic bacterial viruses in aquatic systems

10.4319/lo.2000.45.6.1320 · 2000 · External reference

The ecological role of water-column microbes in the sea

10.3354/meps010257 · 1983 · External reference

Viral effects on bacterial respiration, production and growth efficiency: consistent trends in the Southern Ocean and the Mediterranean Sea

10.1016/j.dsr2.2007.12.004 · 2008 · External reference

Dynamics of virus abundance in coastal seawater

10.1111/j.1574-6941.1996.tb00218.x · 1996 · External reference

Marine viruses and their biogeochemical and ecological effects

10.1038/21119 · 1999 · External reference

Virus ecology of fluvial systems: a blank spot on the map?

10.1111/brv.12202 · 2016 · External reference

Coevolution with viruses drives the evolution of bacterial mutation rates

10.1038/nature06350 · 2007 · External reference

T4 and related phages: structure and development

2006 · External reference

General aspects of lysogeny

2006 · External reference

Marine phages

2006 · External reference

Filamentous phage

2006 · External reference

Unresolved reference

1987 · External reference

Lysogenic induction

1983 · External reference

Biology’s next revolution

10.1038/445369a · 2007 · External reference

Constraints on the coevolution of bacteria and virulent phage: a model, some experiments, and predictions for natural communities

10.1086/284364 · 1985 · External reference

A continuous culture model to examine factors that affect transduction among Pseudomonas aeruginosa strains in freshwater environments

10.1128/aem.61.9.3359-3366.1995 · 1995 · External reference

Potential for transduction of plasmids in a natural freshwater environment: effect of plasmid donor concentration and a natural microbial community on transduction in Pseudomonas aeruginosa

10.1128/aem.53.5.987-995.1987 · 1987 · External reference

Bacterial-viruses in coastal seawater - lytic rather than lysogenic production

10.3354/meps114035 · 1994 · External reference

Lysogeny and virus-induced mortality of bacterioplankton in surface, deep, and anoxic marine waters

10.4319/lo.2003.48.4.1457 · 2003 · External reference

Lysogenic virus–host interactions predominate at deep-sea diffuse-flow hydrothermal vents

10.1038/ismej.2008.73 · 2008 · External reference

Incidence of lysogeny within temperate and extreme soil environments

10.1111/j.1462-2920.2007.01374.x · 2007 · External reference

Virus production and life strategies in aquatic sediments

10.4319/lo.2004.49.2.0459 · 2004 · External reference

Comparison of lysogeny (prophage induction) in heterotrophic bacterial and Synechococcus populations in the Gulf of Mexico and Mississippi River plume

10.1038/ismej.2007.102 · 2008 · External reference

Lysogeny in marine synechococcus

10.1038/415496a · 2002 · External reference

Seasonal variation in lysogeny as depicted by prophage induction in Tampa Bay, Florida

10.1128/aem.68.9.4307-4314.2002 · 2002 · External reference

Nutrient stimulation of lytic phage production in bacterial populations of the Gulf of Mexico

10.3354/ame036009 · 2004 · External reference

The ecology and biogeochemistry of stream biofilms

10.1038/nrmicro.2016.15 · 2016 · External reference

Relevance of polymeric matrix enzymes during biofilm formation

10.1007/s00248-007-9361-8 · 2008 · External reference

Global carbon dioxide emissions from inland waters

10.1038/nature12760 · 2013 · External reference

Biofilm formation as microbial development

10.1146/annurev.micro.54.1.49 · 2000 · External reference

Interactions between biofilms and the environment

10.1111/j.1574-6976.1997.tb00315.x · 1997 · External reference

Evolution of species interactions in a biofilm community

10.1038/nature05514 · 2007 · External reference

Headwaters are critical reservoirs of microbial diversity for fluvial networks

2013 · External reference

Stream microbial ecology

10.1899/09-023.1 · 2010 · External reference

Biofilm, city of microbes

10.1128/jb.182.10.2675-2679.2000 · 2000 · External reference

Contributions of microbial biofilms to ecosystem processes in stream mesocosms

10.1038/nature02152 · 2003 · External reference

Counting viruses and bacteria in photosynthetic microbial mats

10.1128/aem.02863-14 · 2015 · External reference

Optimization of viral profiling approaches reveals strong links between viral and bacterial communities in a eutrophic freshwater lake

10.3354/ame01582 · 2012 · External reference

Marine T4-type bacteriophages, a ubiquitous component of the dark matter of the biosphere

10.1073/pnas.0503404102 · 2005 · External reference

Soil viral communities vary temporally and along a land use transect as revealed by virus-like particle counting and a modified community fingerprinting approach (fRAPD)

10.3389/fmicb.2017.01975 · 2017 · External reference

Recombination and microdiversity in coastal marine cyanophages

10.1111/j.1462-2920.2009.02037.x · 2009 · External reference

Randomly amplified polymorphic DNA PCR as a tool for assessment of marine viral richness

10.1128/aem.02829-07 · 2008 · External reference

Seasonal abundance of lysogenic bacteria in a subtropical estuary

10.1128/aem.64.6.2308-2312.1998 · 1998 · External reference

PAST: paleontological statistics software package for education and data analysis

2001 · External reference

Big impact of the tiny: bacteriophage–bacteria interactions in biofilms

10.1016/j.tim.2019.04.006 · 2019 · External reference

Viruses in soil ecosystems: an unknown quantity within an unexplored territory

10.1146/annurev-virology-101416-041639 · 2017 · External reference

Biofilm formation and persistence on abiotic surfaces in the context of food and medical environments

10.1007/s00203-014-0983-1 · 2014 · External reference

Prevention and control of bacterial infections associated with medical devices

1992 · External reference

Viral effects on bacterial community composition in marine plankton microcosms

10.3354/ame034117 · 2004 · External reference

Prophage spontaneous activation promotes DNA release enhancing biofilm formation in Streptococcus pneumoniae

10.1371/journal.pone.0015678 · 2010 · External reference

Phage-induced lysis enhances biofilm formation in Shewanella oneidensis MR-1

10.1038/ismej.2010.153 · 2011 · External reference

A linear plasmid-like prophage of actinomyces odontolyticus promotes biofilm assembly

10.1128/aem.01263-18 · 2018 · External reference

Comparison of different live/dead stainings for detection and quantification of adherent microorganisms in the initial oral biofilm

10.1007/s00784-012-0792-3 · 2013 · External reference

Bacterial viability in starved and revitalized biofilms: comparison of viability staining and direct culture

2010 · External reference

Confusion over live/dead stainings for the detection of vital microorganisms in oral biofilms - which stain is suitable?

10.1186/1472-6831-14-2 · 2014 · External reference

Stormwater runoff drives viral community composition changes in inland freshwaters

10.3389/fmicb.2014.00105 · 2014 · External reference