Research graph
References from Oral seeding and niche-adaptation of middle ear biofilms in health. Local targets link to admitted publications; unresolved targets remain external evidence.
Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals
10.1128/mbio.00037-15 · 2015 · External reference
Unresolved reference
2005 · External reference
Bacterial microbiota of the nasal passages across the span of human life
10.1016/j.mib.2017.10.023 · 2018 · External reference
QIIME allows analysis of high-throughput community sequencing data
10.1038/nmeth.f.303 · 2010 · External reference
Evolution of a sensory novelty: tympanic ears and the associated neural processing
10.1016/j.brainresbull.2007.10.044 · 2008 · External reference
Passive and dynamic properties of the eustachian tube: quantitative studies in a model
10.1097/00129492-200411000-00030 · 2004 · External reference
Estimation statistics should replace significance testing
10.1038/nmeth.3729 · 2016 · External reference
Surviving the acid test: responses of gram-positive bacteria to low pH
10.1128/mmbr.67.3.429-453.2003 · 2003 · External reference
The Veillonellae: gram-negative cocci with a unique physiology
10.1146/annurev.mi.39.100185.001135 · 1985 · External reference
HemI: a toolkit for illustrating heatmaps
10.1371/journal.pone.0111988 · 2014 · External reference
Towards an ecology of the lung: new conceptual models of pulmonary microbiology and pneumonia pathogenesis
10.1016/s2213-2600(14)70028-1 · 2014 · External reference
The microbiome and the respiratory tract
10.1146/annurev-physiol-021115-105238 · 2016 · External reference
Diversity of the human intestinal microbial flora
10.1126/science.1110591 · 2005 · External reference
UPARSE: highly accurate OTU sequences from microbial amplicon reads
10.1038/nmeth.2604 · 2013 · External reference
Updating the 97% identity threshold for 16S ribosomal RNA OTUs
10.1093/bioinformatics/bty113 · 2018 · External reference
Phylogenetic and comparative genomics of the family Leptotrichiaceae and introduction of a novel fingerprinting MLVA for Streptobacillus moniliformis
10.1186/s12864-016-3206-0 · 2016 · External reference
What happened to the streptococci: overview of taxonomic and nomenclature changes
10.1128/cmr.15.4.613-630.2002 · 2002 · External reference
Culture-independent molecular analysis of microbial constituents of the healthy human outer ear
10.1128/jcm.41.1.295-303.2003 · 2003 · External reference
Oral microbiomes: more and more importance in oral cavity and whole body
10.1007/s13238-018-0548-1 · 2018 · External reference
Topographical and temporal diversity of the human skin microbiome
10.1126/science.1171700 · 2009 · External reference
The relationship between microbial community evenness and function in slow sand filters
10.1128/mbio.00729-15 · 2015 · External reference
Direct detection of bacterial biofilms on the middle-ear mucosa of children with chronic otitis media
10.1001/jama.296.2.202 · 2006 · External reference
InteractiVenn: a web-based tool for the analysis of sets through Venn diagrams
10.1186/s12859-015-0611-3 · 2015 · External reference
Moving beyond P values: data analysis with estimation graphics
10.1038/s41592-019-0470-3 · 2019 · External reference
Descriptions of Eubacterium timidum sp. nov., Eubacterium brachy sp. nov., and Eubacterium nodatum sp. nov. isolated from human periodontitis
1980 · External reference
Pumping and clearance function of the eustachian tube
10.1016/s0196-0709(85)80095-8 · 1985 · External reference
Streptococcus rubneri sp. nov., isolated from the human throat
10.1099/ijs.0.048538-0 · 2013 · External reference
The respiratory tract microbiome and lung inflammation: a two-way street
10.1038/mi.2016.108 · 2017 · External reference
Mechanics of the human middle ear: pressure regulation in aviation and diving, a non-traumatic method
1967 · External reference
Examining the evidence for an adult healthy middle ear microbiome
10.1128/msphere.00456-19 · 2019 · External reference
Posture and pressure within the internal jugular vein
10.3109/00016486909121565 · 1969 · External reference
KEGG for integration and interpretation of large-scale molecular data sets
10.1093/nar/gkr988 · 2011 · External reference
Acoustical transmission-line model of the middle-ear cavities and mastoid air cells
10.1121/1.4916200 · 2015 · External reference
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
10.1099/ijs.0.059774-0 · 2014 · External reference
The nasal microbiome mirrors and potentially shapes olfactory function
10.1038/s41598-018-19438-3 · 2018 · External reference
Development of a dual-index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the MiSeq Illumina sequencing platform
10.1128/aem.01043-13 · 2013 · External reference
16S/23S rRNA sequencing
1991 · External reference
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
10.1038/nbt.2676 · 2013 · External reference
Physiological modulation of eustachian tube function
10.3109/00016488709128281 · 1987 · External reference
Divergent extremes but convergent recovery of bacterial and archaeal soil communities to an ongoing subterranean coal mine fire
10.1038/ismej.2017.1 · 2017 · External reference
Perspectives of pharmacological treatment in otosclerosis
10.1007/s00405-012-2126-0 · 2013 · External reference
Cell biology of tubotympanum in relation to pathogenesis of otitis media - a review
10.1016/s0264-410x(00)00273-5 · 2001 · External reference
Non-pathogenic Neisseria: members of an abundant, multi-habitat, diverse genus
10.1099/mic.0.000086 · 2015 · External reference
Bell’s palsy may have relations to bacterial infection
10.1016/j.mehy.2008.09.023 · 2009 · External reference
UniFrac: a new phylogenetic method for comparing microbial communities
10.1128/aem.71.12.8228-8235.2005 · 2005 · External reference
Surgical anatomy and pathology of the middle ear
2016 · External reference
An equilibrium theory of insular zoogeography
10.1111/j.1558-5646.1963.tb03295.x · 1963 · External reference
An evolutionary perspective on middle ears
10.1016/j.heares.2009.09.004 · 2010 · External reference
Staphylococcus aureus and the oral cavity: an overlooked source of carriage and infection?
10.1016/j.ajic.2014.09.015 · 2015 · External reference
Microbiomes of the normal middle ear and ears with chronic otitis media
10.1002/lary.26579 · 2017 · External reference
Release LTPs104 of the all-species living tree
10.1016/j.syapm.2011.03.001 · 2011 · External reference
Gram-positive anaerobic cocci--commensals and opportunistic pathogens
10.1111/1574-6976.12005 · 2013 · External reference
Facial paresis secondary to an aggressive acute bacterial rhinosinusitis
10.1001/jamaoto.2015.1086 · 2015 · External reference
Noninvasive in vivo optical detection of biofilm in the human middle ear
10.1073/pnas.1201592109 · 2012 · External reference
Occurrence of staphylococci in the oral cavities of healthy adults and nasal oral trafficking of the bacteria
10.1099/jmm.0.47561-0 · 2008 · External reference
Rapid succession within the Veillonella population of developing human oral biofilm in situ
10.1128/jb.01958-05 · 2006 · External reference
Anatomy of the eustachian tube
10.1001/archotol.1973.00780010006002 · 1973 · External reference
Microbial biogeography and ecology of the mouth and implications for periodontal diseases
10.1111/prd.12268 · 2020 · External reference
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
10.1093/nar/gks1219 · 2013 · External reference
Bacterial communities in aerosols and manure samples from two different dairies in central and Sonoma valleys of California
10.1371/journal.pone.0017281 · 2011 · External reference
Middle ear mucin glycoprotein: purification and interaction with nontypable Haemophilus influenzae and Moraxella catarrhalis
1997 · External reference
Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences
10.7717/peerj.545 · 2014 · External reference
Shaping the metabolism of intestinal Bacteroides population through diet to improve human health
10.3389/fmicb.2017.00376 · 2017 · External reference
Cautionary tale of using 16S rRNA gene sequence similarity values in identification of human-associated bacterial species
10.1099/ijs.0.000161 · 2015 · External reference
Miscellaneous catalase-negative, gram-positive cocci: emerging opportunists
10.1128/jcm.40.4.1129-1133.2002 · 2002 · External reference
Mucociliary flow in the middle ear
10.1177/000348947108000306 · 1971 · External reference
Age-related morphologic differences in the components of the eustachian tube/middle ear system
10.1177/000348948909801104 · 1989 · External reference
Aerotolerance of human clinical isolates of Prevotella spp
10.1046/j.1365-2672.2003.01902.x · 2003 · External reference
Quantifying the roles of immigration and chance in shaping prokaryote community structure
10.1111/j.1462-2920.2005.00956.x · 2006 · External reference
Taxonomic parameters revisited: tarnished gold standards
2006 · External reference
Otosclerosis: an organ-specific inflammatory disease with sensorineural hearing loss
10.1007/s00405-009-0967-y · 2009 · External reference
Mucin glycan foraging in the human gut microbiome
10.3389/fgene.2015.00081 · 2015 · External reference
Short- and long-term effects of diving on pulmonary function
10.1183/16000617.0097-2016 · 2017 · External reference
Detection of bacteria in healthy middle ears during cochlear implantation
10.1001/archoto.2008.556 · 2009 · External reference
Non-hemolytic group B streptococcus as a cause of chemotherapy port infection
10.1016/j.idcr.2017.08.007 · 2017 · External reference
Application of a neutral community model to assess structuring of the human lung microbiome
10.1128/mbio.02284-14 · 2015 · External reference
Nephele: a cloud platform for simplified, standardized and reproducible microbiome data analysis
10.1093/bioinformatics/btx617 · 2017 · External reference
Biogeography of the oral microbiome: the site-specialist hypothesis
2019 · External reference
Regulatory linkages between flagella and surfactant during swarming behavior: lubricating the flagellar propeller?
10.1128/jb.00019-12 · 2012 · External reference
The All-Species Living Tree project: a 16S rRNA-based phylogenetic tree of all sequenced type strains
10.1016/j.syapm.2008.07.001 · 2008 · External reference
Mucin promotes rapid surface motility in Pseudomonas aeruginosa
10.1128/mbio.00073-12 · 2012 · External reference
Surfactant in the middle ear and eustachian tube: a review
10.1016/s0165-5876(02)00203-3 · 2002 · External reference
Surfactant proteins A and D inhibit the growth of Gram-negative bacteria by increasing membrane permeability
10.1172/jci16889 · 2003 · External reference
MUSCLE: a multiple sequence alignment method with reduced time and space complexity
10.1186/1471-2105-5-113 · 2004 · External reference
MUSCLE: multiple sequence alignment with high accuracy and high throughput
10.1093/nar/gkh340 · 2004 · External reference
Molecular evolutionary genetics analysis across computing platforms
10.1093/molbev/msy096 · 2018 · External reference
