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References from Lysosomal multi-omics reveals altered sphingolipid catabolism associated with lysosomal dysfunction in the aging brain. Local targets link to admitted publications; unresolved targets remain external evidence.
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APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge
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AD-linked R47H-TREM2 mutation induces disease-enhancing microglial states via AKT hyperactivation
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A Unique Microglia Type Associated with Restricting Development of Alzheimer's Disease
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White matter aging drives microglial diversity
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The Major Risk Factors for Alzheimer's Disease: Age, Sex, and Genes Modulate the Microglia Response to Abeta Plaques
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The TREM2-APOE Pathway Drives the Transcriptional Phenotype of Dysfunctional Microglia in Neurodegenerative Diseases
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Unified feature association networks through integration of transcriptomic and proteomic data
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PLA2G4A/cPLA2-mediated lysosomal membrane damage leads to inhibition of autophagy and neurodegeneration after brain trauma
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Detection and structural elucidation of ether glycerophosphoethanolamine from cortical lysosomes following traumatic brain injury using UPLC-HDMSE
2019 · External reference
Age-related myelin degradation burdens the clearance function of microglia during aging
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Lysosome dysfunction as a cause of neurodegenerative diseases: Lessons from frontotemporal dementia and amyotrophic lateral sclerosis
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Autophagy in Human Diseases
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Autophagy balances inflammation in innate immunity
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Sphingolipids and neuronal degeneration in lysosomal storage disorders
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Altered TFEB-mediated lysosomal biogenesis in Gaucher disease iPSC-derived neuronal cells
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Lipid-induced lysosomal damage after demyelination corrupts microglia protective function in lysosomal storage disorders
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Dysregulated autophagy as a new aspect of the molecular pathogenesis of Krabbe disease
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Broken Balance: Emerging Cross-Talk Between Proteostasis and Lipostasis in Neurodegenerative Diseases
10.3390/cells14110845 · 2025 · External reference
Lysosomal dysfunction in neurodegeneration: emerging concepts and methods
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PGRN as an emerging regulator of lipid metabolism in neurodegenerative diseases
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Prosaposin in CNS health and disease, metabolic stress and exercise adaptation
10.1007/s00109-026-02643-3 · 2026 · External reference
Delineating Amyloid Plaque Associated Neuronal Sphingolipids in Transgenic Alzheimer's Disease Mice (tgArcSwe) Using MALDI Imaging Mass Spectrometry
10.1021/acschemneuro.6b00391 · 2017 · External reference
Spatial Neurolipidomics at the Single Amyloid-beta Plaque Level in Postmortem Human Alzheimer's Disease Brain
10.1021/acschemneuro.4c00006 · 2024 · External reference
Early plasma ceramide and sphingomyelin levels reflect APOE genotype but not familial Alzheimer's disease gene mutations in female 5xFAD mice, with brain-region specific sphingolipid alterations
10.1016/j.nbd.2025.106923 · 2025 · External reference
Lysosomal metabolomics reveals V-ATPase- and mTOR-dependent regulation of amino acid efflux from lysosomes
10.1126/science.aan6298 · 2017 · External reference
CLN3 is required for the clearance of glycerophosphodiesters from lysosomes
10.1038/s41586-022-05221-y · 2022 · External reference
Subregion- and cell type-restricted gene knockout in mouse brain
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Fate mapping reveals origins and dynamics of monocytes and tissue macrophages under homeostasis
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Simultaneous quantification of cardiolipin, bis(monoacylglycero)phosphate and their precursors by hydrophilic interaction LC-MS/MS including correction of isotopic overlap
10.1021/ac1021826 · 2010 · External reference
The Bis(monoacylglycero)-phosphate Hypothesis: From Lysosomal Function to Therapeutic Avenues
10.1146/annurev-biochem-092823-113814 · 2024 · External reference
Inflammatory disease progression shapes nanoparticle biomolecular corona-mediated immune activation profiles
10.1038/s41467-025-56210-4 · 2025 · External reference
Effect of PTFGRN Expression on the Proteomic Profile of A431 Cells and Determination of the PTGFRN Interactome
10.1021/acsomega.4c00042 · 2024 · External reference
Role of cellular retinol-binding protein, type 1 and retinoid homeostasis in the adult mouse heart: A multi-omic approach
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Profiling of purified autophagic vesicle degradome in the maturing and aging brain
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VPS4A is the selective receptor for lipophagy in mice and humans
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Late Endosomes Act as mRNA Translation Platforms and Sustain Mitochondria in Axons
10.1016/j.cell.2018.11.030 · 2019 · External reference
Secretome translation shaped by lysosomes and lunapark-marked ER junctions
10.1038/s41586-025-09718-0 · 2026 · External reference
Targeting phospholipase PLAG-15 promotes healthy aging in C. elegans via lysosomal-related genes
10.1016/j.isci.2025.112880 · 2025 · External reference
PLA2G15 is a BMP hydrolase and its targeting ameliorates lysosomal disease
10.1038/s41586-025-08942-y · 2025 · External reference
Atp7b-dependent choroid plexus dysfunction causes transient copper deficit and metabolic changes in the developing mouse brain
10.1371/journal.pgen.1010558 · 2023 · External reference
Early life changes in histone landscape protect against age-associated amyloid toxicities through HSF-1-dependent regulation of lipid metabolism
10.1038/s43587-023-00537-4 · 2024 · External reference
Characterization of the cellular lipid composition during SARS-CoV-2 infection
10.1007/s00216-023-04825-1 · 2023 · External reference
Mechanisms and functions of lysosomal lipid homeostasis
10.1016/j.chembiol.2025.02.003 · 2025 · External reference
PLD3 and PLD4 synthesize S,S-BMP, a key phospholipid enabling lipid degradation in lysosomes
10.1016/j.cell.2024.09.036 · 2024 · External reference
N-Acetyl-L-leucine improves functional recovery and attenuates cortical cell death and neuroinflammation after traumatic brain injury in mice
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Glycerophospholipid dysregulation after traumatic brain injury
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Role and Function of Peroxisomes in Neuroinflammation
10.3390/cells13191655 · 2024 · External reference
Regulation of the lysosome by sphingolipids: Potential role in aging
10.1016/j.jbc.2022.102118 · 2022 · External reference
Lysosomal Ceramide Metabolism Disorders: Implications in Parkinson's Disease
10.3390/jcm9020594 · 2020 · External reference
Elevated glucosylsphingosine in Gaucher disease induced pluripotent stem cell neurons deregulates lysosomal compartment through mammalian target of rapamycin complex 1
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The utility of protein and mRNA correlation
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Network analysis of epidermal growth factor signaling using integrated genomic, proteomic and phosphorylation data
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Integrated Proteogenomic Characterization of Human High-Grade Serous Ovarian Cancer
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Synaptic pruning by microglia is necessary for normal brain development
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The CENP-A nucleosome: a dynamic structure and role at the centromere
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Nucleophagy: from homeostasis to disease
10.1038/s41418-018-0266-5 · 2019 · External reference
Prosaposin variants in sporadic, familial, and early-onset Parkinson's disease: a Taiwanese case-control study and meta-analysis
10.1038/s41598-024-51646-y · 2024 · External reference
Cln1 gene disruption in mice reveals a common pathogenic link between two of the most lethal childhood neurodegenerative lysosomal storage disorders
10.1093/hmg/ddv266 · 2015 · External reference
Lipid-droplet-accumulating microglia represent a dysfunctional and proinflammatory state in the aging brain
10.1038/s41593-019-0566-1 · 2020 · External reference
Beyond Fluidity: The Role of Lipid Unsaturation in Membrane Function
10.1101/cshperspect.a041409 · 2023 · External reference
Expanding our understanding of Guillain-Barre syndrome: Recent advances and clinical implications
10.1002/eji.202250336 · 2024 · External reference
Acid sphingomyelinase activity is regulated by membrane lipids and facilitates cholesterol transfer by NPC2
10.1194/jlr.m054528 · 2014 · External reference
Saposin D: a sphingomyelinase activator
10.1016/s0006-291x(88)80855-6 · 1988 · External reference
Lysosomal ceramides regulate cathepsin B-mediated processing of saposin C and glucocerebrosidase activity
10.1093/hmg/ddac047 · 2022 · External reference
Oligodendroglial macroautophagy is essential for myelin sheath turnover to prevent neurodegeneration and death
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Autophagic degradation of CNS myelin maintains axon integrity
10.15698/cst2022.12.274 · 2022 · External reference
Disruption of Oligodendroglial Autophagy Leads to Myelin Morphological Deficits, Neuronal Apoptosis, and Cognitive Decline in Aged Mice
10.1002/glia.70012 · 2025 · External reference
mTOR hyperactivity mediates lysosomal dysfunction in Gaucher's disease iPSC-neuronal cells
10.1242/dmm.038596 · 2019 · External reference
Functional and transcriptional profiling of microglial activation during the chronic phase of TBI identifies an age-related driver of poor outcome in old mice
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Expression of Ripk1 and DAM genes correlates with severity and progression of Krabbe disease
10.1093/hmg/ddab159 · 2021 · External reference
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Multi-OMICS: a critical technical perspective on integrative lipidomics approaches
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APOE4/4 is linked to damaging lipid droplets in Alzheimer's disease microglia
10.1038/s41586-024-07185-7 · 2024 · External reference
Lysosomal acid lipase and lipid metabolism: new mechanisms, new questions, and new therapies
10.1097/mol.0000000000000507 · 2018 · External reference
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Cholesterol-mediated activation of acid sphingomyelinase disrupts autophagy in the retinal pigment epithelium
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Autophagy and the cell biology of age-related disease
10.1038/s41556-018-0235-8 · 2018 · External reference
Sphingolipid lysosomal storage disorders
10.1038/nature13476 · 2014 · External reference
The lysosomal function of progranulin, a guardian against neurodegeneration
10.1007/s00401-018-1861-8 · 2018 · External reference
Glycosphingolipids and lysosomal storage disorders as illustrated by gaucher disease
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Metachromatic Leukodystrophy: Diagnosis, Modeling, and Treatment Approaches
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