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References from Systematic transcriptomic evaluation of blastoid models of early human development. Local targets link to admitted publications; unresolved targets remain external evidence.
Exploring early human embryo development
10.1126/science.aas9302 · 2018 · External reference
Technical challenges of studying early human development
10.1242/dev.201797 · 2023 · External reference
Early human embryonic development: Blastocyst formation to gastrulation
10.1016/j.devcel.2021.12.022 · 2022 · External reference
Human blastoids model blastocyst development and implantation
10.1038/s41586-021-04267-8 · 2022 · External reference
Naive stem cell blastocyst model captures human embryo lineage segregation
10.1016/j.stem.2021.04.031 · 2021 · External reference
Blastocyst-like structures generated from human pluripotent stem cells
10.1038/s41586-021-03356-y · 2021 · External reference
Generation of human blastocyst-like structures from pluripotent stem cells
10.1038/s41421-021-00316-8 · 2021 · External reference
Modelling human blastocysts by reprogramming fibroblasts into iBlastoids
10.1038/s41586-021-03372-y · 2021 · External reference
A comprehensive human embryo reference tool using single-cell RNA-sequencing data
10.1038/s41592-024-02493-2 · 2025 · External reference
A single cell characterisation of human embryogenesis identifies pluripotency transitions and putative anterior hypoblast centre
10.1038/s41467-021-23758-w · 2021 · External reference
Single-Cell RNA-Seq Reveals Lineage and X Chromosome Dynamics in Human Preimplantation Embryos
10.1016/j.cell.2016.03.023 · 2016 · External reference
A developmental landscape of 3D-cultured human pre-gastrulation embryos
10.1038/s41586-019-1875-y · 2020 · External reference
Reconstituting the transcriptome and DNA methylome landscapes of human implantation
10.1038/s41586-019-1500-0 · 2019 · External reference
Single-cell transcriptomic characterization of a gastrulating human embryo
10.1038/s41586-021-04158-y · 2021 · External reference
Integrated analysis of multimodal single-cell data
10.1016/j.cell.2021.04.048 · 2021 · External reference
scReClassify: post hoc cell type classification of single-cell RNA-seq data
10.1186/s12864-019-6305-x · 2019 · External reference
Integrated pseudotime analysis of human pre-implantation embryo single-cell transcriptomes reveals the dynamics of lineage specification
10.1016/j.stem.2021.04.027 · 2021 · External reference
Uncovering cell identity through differential stability with Cepo
10.1038/s43588-021-00172-2 · 2021 · External reference
Single-cell RNA sequencing reveals regulatory mechanism for trophoblast cell-fate divergence in human peri-implantation conceptuses
10.1371/journal.pbio.3000187 · 2019 · External reference
scClassify: sample size estimation and multiscale classification of cells using single and multiple reference
10.15252/msb.20199389 · 2020 · External reference
Improved reconstruction of single-cell developmental potential with CytoTRACE 2
10.1038/s41592-025-02857-2 · 2025 · External reference
Single cell transcriptome analysis of human, marmoset and mouse embryos reveals common and divergent features of preimplantation development
10.1242/dev.167833 · 2018 · External reference
A developmental coordinate of pluripotency among mice, monkeys and humans
10.1038/nature19096 · 2016 · External reference
Generating human blastoids modeling blastocyst-stage embryos and implantation
10.1038/s41596-023-00802-1 · 2023 · External reference
Unraveling hallmark suitability for staging pre- and post-implantation stem cell models
10.1016/j.celrep.2024.114232 · 2024 · External reference
Spatial profiling of early primate gastrulation in utero
10.1038/s41586-022-04953-1 · 2022 · External reference
Scater: pre-processing, quality control, normalization and visualization of single-cell RNA-seq data in R
10.1093/bioinformatics/btw777 · 2017 · External reference
A step-by-step workflow for low-level analysis of single-cell RNA-seq data with Bioconductor
2016 · External reference
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors
10.1016/j.cels.2019.03.003 · 2019 · External reference
The igraph software package for complex network research.
2006 · External reference
funkyheatmap: Visualising data frames with mixed data types
2025 · External reference
Unresolved reference
2017 · External reference
Derivation of Pluripotent Stem Cells with In Vivo Embryonic and Extraembryonic Potency
10.1016/j.cell.2017.02.005 · 2017 · External reference
