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References from Investigating genomic structure using changept : A Bayesian segmentation model. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nature01262
10.1038/nature01262 · External reference
An integrated encyclopedia of DNA elements in the human genome
10.1038/nature11247 · 2012 · External reference
10.1007/bf02103140
10.1007/bf02103140 · External reference
10.1080/07391102.2001.10506743
10.1080/07391102.2001.10506743 · External reference
10.1016/s0378-1119(01)00644-8
10.1016/s0378-1119(01)00644-8 · External reference
Compositional heterogeneity within and among isochores in mammalian genomes. I. CsCl and sequence analyses
10.1016/s0378-1119(01)00667-9 · 2001 · External reference
10.1038/35057062
10.1038/35057062 · External reference
10.1016/j.ygeno.2007.05.006
10.1016/j.ygeno.2007.05.006 · External reference
10.1101/gr.4910606
10.1101/gr.4910606 · External reference
Identification of conserved regulatory elements by comparative genome analysis
10.1186/1475-4924-2-13 · 2003 · External reference
10.1371/journal.pbio.0030285
10.1371/journal.pbio.0030285 · External reference
10.1186/1475-4924-1-5
10.1186/1475-4924-1-5 · External reference
Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis
10.1093/nar/28.21.4317 · 2000 · External reference
10.1016/s0966-842x(01)02079-0
10.1016/s0966-842x(01)02079-0 · External reference
A sliding window-based method to detect selective constraints in protein-coding genes and its application to RNA viruses
10.1007/s00239-002-2346-9 · 2002 · External reference
10.1101/gr.4326505
10.1101/gr.4326505 · External reference
Conditional Markov processes
10.1137/1105015 · 1960 · External reference
10.1007/bf02458837
10.1007/bf02458837 · External reference
10.1016/0097-8485(92)80037-z
10.1016/0097-8485(92)80037-z · External reference
Maximum likelihood from incomplete data via the EM algorithm
10.1111/j.2517-6161.1977.tb01600.x · 1977 · External reference
10.1093/nar/26.4.1107
10.1093/nar/26.4.1107 · External reference
Segmentation of yeast DNA using hidden Markov models
10.1093/bioinformatics/15.12.980 · 1999 · External reference
Mining Bacillus subtilis chromosome heterogeneities using hidden Markov models
10.1093/nar/30.6.1418 · 2002 · External reference
Probabilistic methods of identifying genes in prokaryotic genomes: connections to the HMM theory
10.1093/bib/5.2.118 · 2004 · External reference
Hidden Markov models in computational biology: applications to protein modeling
10.1006/jmbi.1994.1104 · 1994 · External reference
Continuous-index hidden Markov modelling of array CGH copy number data
10.1093/bioinformatics/btm059 · 2007 · External reference
BioHMM: a heterogeneous hidden Markov model for segmenting array CGH data
10.1093/bioinformatics/btl089 · 2006 · External reference
A comparison study: applying segmentation to array CGH data for downstream analyses
10.1093/bioinformatics/bti677 · 2005 · External reference
Hidden Markov models approach to the analysis of array CGH data
10.1016/j.jmva.2004.02.008 · 2004 · External reference
Sarment: Python modules for HMM analysis and partitioning of sequences
10.1093/bioinformatics/bti533 · 2005 · External reference
Detecting homogeneous segments in DNA sequences by using hidden Markov models
10.1111/1467-9876.00191 · 2000 · External reference
A Bayesian approach to DNA sequence segmentation
10.1111/j.0006-341x.2004.00206.x · 2004 · External reference
A heuristic Bayesian method for segmenting DNA sequence alignments and detecting evidence for recombination and gene conversion
10.2202/1544-6115.1238 · 2006 · External reference
Bayesian hidden Markov model for DNA sequence segmentation: a prior sensitivity analysis
10.1016/j.csda.2008.07.007 · 2009 · External reference
Testing a sequence of observations for a shift in location
10.1080/01621459.1977.10479935 · 1977 · External reference
On the likelihood ratio test for a shift in location of normal populations
1979 · External reference
Bayesian inference on biopolymer models
10.1093/bioinformatics/15.1.38 · 1999 · External reference
10.1089/10665270050081487
10.1089/10665270050081487 · External reference
Computation of biopolymers: a general approach to different problems
10.1016/0303-2647(93)90058-k · 1993 · External reference
Genome segmentation using piecewise constant intensity models and reversible jump MCMC
10.1093/bioinformatics/18.suppl_2.s211 · 2002 · External reference
Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
10.1093/biomet/82.4.711 · 1995 · External reference
A Bayesian approach to discriminate between alternative DNA sequence segmentations
10.1093/bioinformatics/18.2.226 · 2002 · External reference
10.1089/cmb.2006.13.1369
10.1089/cmb.2006.13.1369 · External reference
10.1089/cmb.2007.0173
10.1089/cmb.2007.0173 · External reference
10.1093/molbev/msp299
10.1093/molbev/msp299 · External reference
10.1371/journal.pone.0097336
10.1371/journal.pone.0097336 · External reference
10.1023/b:mcap.0000012414.14405.15
10.1023/b:mcap.0000012414.14405.15 · External reference
Compositional segmentation and long-range fractal correlations in DNA sequences
1996 · External reference
IsoFinder: computational prediction of isochores in genome sequences
10.1093/nar/gkh399 · 2004 · External reference
SEGMENT: identifying compositional domains in DNA sequences
10.1093/bioinformatics/15.12.974 · 1999 · External reference
10.1016/s0097-8485(02)00010-4
10.1016/s0097-8485(02)00010-4 · External reference
10.1093/molbev/msi115
10.1093/molbev/msi115 · External reference
Detecting the borders between coding and non-coding DNA regions in prokaryotes based on recursive segmentation and nucleotide doublets statistics
10.1186/1471-2164-13-s8-s19 · 2012 · External reference
10.1093/nar/gkq532
10.1093/nar/gkq532 · External reference
10.1093/nar/gks917
10.1093/nar/gks917 · External reference
10.1016/j.gene.2007.01.028
10.1016/j.gene.2007.01.028 · External reference
10.1016/j.bbrc.2003.09.198
10.1016/j.bbrc.2003.09.198 · External reference
Identifying change-points in biological sequences via sequential importance sampling
10.1007/s10666-008-9160-8 · 2009 · External reference
10.1007/s10479-010-0687-0
10.1007/s10479-010-0687-0 · External reference
Unresolved reference
2011 · External reference
Circular binary segmentation for the analysis of array‐based DNA copy number data
10.1093/biostatistics/kxh008 · 2004 · External reference
10.1093/bioinformatics/btl646
10.1093/bioinformatics/btl646 · External reference
10.1111/j.2517-6161.1996.tb02080.x
10.1111/j.2517-6161.1996.tb02080.x · External reference
Sparsity and smoothness via the fused lasso
10.1111/j.1467-9868.2005.00490.x · 2005 · External reference
Spatial smoothing and hot spot detection for CGH data using the fused lasso
10.1093/biostatistics/kxm013 · 2008 · External reference
A modified Bayes information criterion with applications to the analysis of comparative genomic hybridization data
10.1111/j.1541-0420.2006.00662.x · 2007 · External reference
10.1093/bioinformatics/btq716
10.1093/bioinformatics/btq716 · External reference
Multiscale DNA partitioning: statistical evidence for segments
10.1093/bioinformatics/btu180 · 2014 · External reference
Statistical methods for DNA sequence segmentation
10.1214/ss/1028905933 · 1998 · External reference
10.1093/molbev/msp307
10.1093/molbev/msp307 · External reference
10.1126/science.155.3760.279
10.1126/science.155.3760.279 · External reference
10.1201/9780429258480
10.1201/9780429258480 · 2003 · External reference
Sequence segmentation
10.1007/978-1-60327-159-2_11 · 2008 · External reference
Computational characterization of 3′ splice variants in the GFAP isoform family
10.1371/journal.pone.0033565 · 2012 · External reference
Promoter structure of human sonic hedgehog gene
10.1016/s0167-4781(98)00243-7 · 1998 · External reference
10.1101/gr.926603
10.1101/gr.926603 · External reference
10.1093/embo-reports/kve230
10.1093/embo-reports/kve230 · External reference
