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References from KENeV : A web-application for the automated reconstruction and visualization of the enriched metabolic and signaling super-pathways deriving from genomic experiments. Local targets link to admitted publications; unresolved targets remain external evidence.
Tuning gene expression to changing environments: from rapid responses to evolutionary adaptation
10.1038/nrg2398 · 2002 · External reference
10.1038/nature01254
10.1038/nature01254 · External reference
10.1073/pnas.0506580102
10.1073/pnas.0506580102 · External reference
GOEAST: a web-based software toolkit for Gene Ontology enrichment analysis
10.1093/nar/gkn276 · 2008 · External reference
10.1093/nar/gkn923
10.1093/nar/gkn923 · External reference
10.1038/75556
10.1038/75556 · External reference
10.1093/nar/28.1.27
10.1093/nar/28.1.27 · External reference
10.1371/journal.pcbi.1002375
10.1371/journal.pcbi.1002375 · External reference
Onto-tools, the toolkit of the modern biologist: onto-express, onto-compare, onto-design and onto-translate
10.1093/nar/gkg624 · 2003 · External reference
GoMiner: a resource for biological interpretation of genomic and proteomic data
10.1186/gb-2003-4-4-r28 · 2003 · External reference
GeneTrail — advanced gene set enrichment analysis
10.1093/nar/gkm323 · 2007 · External reference
Methods and approaches in the topology-based analysis of biological pathways
10.3389/fphys.2013.00278 · 2013 · External reference
10.1101/gr.6202607
10.1101/gr.6202607 · External reference
Calculating the statistical significance of changes in pathway activity from gene expression data
10.2202/1544-6115.1055 · 2004 · External reference
Exploiting statistical methodologies and controlled vocabularies for prioritized functional analysis of genomic experiments: the StRAnGER web application
2011 · External reference
Unresolved reference
2013 · External reference
Autworks: a cross-disease network biology application for autism and related disorders
10.1186/1755-8794-5-56 · 2012 · External reference
10.1214/aos/1176344552
10.1214/aos/1176344552 · External reference
10.1093/bioinformatics/btg015
10.1093/bioinformatics/btg015 · External reference
LibSBML: an API library for SBML
10.1093/bioinformatics/btn051 · 2008 · External reference
10.1093/bioinformatics/btq675
10.1093/bioinformatics/btq675 · External reference
Modeling and simulation using Cell Designer
10.1007/978-1-4939-0805-9_11 · 2014 · External reference
10.1016/j.tcb.2012.08.001
10.1016/j.tcb.2012.08.001 · External reference
10.1038/nrm3290
10.1038/nrm3290 · External reference
Unresolved reference
2004 · External reference
10.1093/bioinformatics/btt285
10.1093/bioinformatics/btt285 · External reference
10.1093/bioinformatics/btp167
10.1093/bioinformatics/btp167 · External reference
KEGGParser: parsing and editing KEGG pathway maps in Matlab
10.1093/bioinformatics/bts730 · 2013 · External reference
KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats
10.1093/bioinformatics/btr377 · 2011 · External reference
10.1371/journal.pone.0007710
10.1371/journal.pone.0007710 · External reference
KEGGconverter: a tool for the in-silico modelling of metabolic networks of the KEGG Pathways database
10.1186/1471-2105-10-324 · 2009 · External reference
Linking Proteins to Signaling Pathways for Experiment Design and Evaluation
10.1371/journal.pone.0036202 · 2012 · External reference
10.1038/nprot.2008.211
10.1038/nprot.2008.211 · External reference
10.1093/nar/gkt439
10.1093/nar/gkt439 · External reference
10.1093/nar/gkn863
10.1093/nar/gkn863 · External reference
