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References from Computer-aided Molecular Design of Compounds Targeting Histone Modifying Enzymes. Local targets link to admitted publications; unresolved targets remain external evidence.
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Chemical biology of lysine demethylases
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The future therapeutic potential of histone demethylases: a critical analysis
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SnapShot: histone modifications
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10.2174/138161213804581954 · 2013 · External reference
Sorting out functions of sirtuins in cancer
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The expanding field of poly(ADP-ribosyl)ation reactions. “Protein modifications: beyond the usual suspects” review series
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Metal-based inhibition of poly(ADP-ribose) polymerase—the guardian angel of DNA
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10.1038/nrm3334 · 2012 · External reference
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Peptidylarginine deiminase 4 and citrullination in health and disease
10.1016/j.autrev.2009.06.002 · 2010 · External reference
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K8 and K12 are biotinylated in human histone H4
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Function and metabolism of sirtuin metabolite O-acetyl-ADP-ribose
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Phosphorylation of histone H3 Thr-45 is linked to apoptosis
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Phosphorylation of basic amino acid residues in proteins: important but easily missed
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O-GlcNAcylation, an epigenetic mark
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Successful applications of computer aided drug discovery: moving drugs from concept to the clinic
10.2174/156802610790232251 · 2010 · External reference
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Freely accessible databases of commercial compounds for high-throughput virtual screenings
10.2174/156802612800166710 · 2012 · External reference
CoCoCo: a free suite of multiconformational chemical databases for high-throughput virtual screening purposes
10.1039/c0mb00039f · 2010 · External reference
Use of large multiconformational databases with structure-based pharmacophore models for fast screening of commercial compound collections
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Targeting epigenetics in drug discovery
10.1002/cmdc.201400084 · 2014 · External reference
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10.1016/j.tibtech.2014.09.002
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Epigenetic drug discovery special issue
10.1016/j.bmc.2011.05.053 · 2009 · External reference
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10.1016/j.drudis.2011.02.003
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Inhibitors of DNA methyltransferases: insights from computational studies
2012 · External reference
Discovery of a series of small molecules as potent histone deacetylase inhibitors
10.3109/14756366.2013.780237 · 2014 · External reference
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Energy based pharmacophore mapping of HDAC inhibitors against class I HDAC enzymes
10.1016/j.bbapap.2012.08.009 · 2013 · External reference
10.1016/j.bmcl.2012.12.067
10.1016/j.bmcl.2012.12.067 · External reference
Docking-enabled pharmacophore model for histone deacetylase 8 inhibitors and its application in anti-cancer drug discovery
10.1016/j.jmgm.2010.07.007 · 2010 · External reference
Computational identification of novel histone deacetylase inhibitors by docking based QSAR
10.1016/j.compbiomed.2012.04.001 · 2012 · External reference
10.1021/ci800366f
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3D-QSAR studies of HDACs inhibitors using pharmacophore-based alignment
10.1016/j.ejmech.2008.12.008 · 2009 · External reference
Pharmacophore modeling and virtual screening studies to design some potential histone deacetylase inhibitors as new leads
10.1016/j.jmgm.2007.07.002 · 2008 · External reference
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Discovery of inhibitors of Schistosoma mansoni HDAC8 by combining homology modeling
10.1021/ci5004653 · 2014 · External reference
Structure-based identification of drug-like inhibitors of p300 histone acetyltransferase
2013 · External reference
10.1016/j.chembiol.2010.03.006
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10.1021/cb4001926
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Expanding the druggable space of the LSD1/CoREST epigenetic target: new potential binding regions for drug-like molecules, peptides, protein partners, and chromatin
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Lysine-specific demethylase 1-selective inactivators: protein-targeted drug delivery mechanism
10.1002/anie.201303999 · 2013 · External reference
10.5936/csbj.201402002 · Admitted local publication
Heterogeneous antibody-based activity assay for lysine specific demethylase 1 (LSD1) on a histone peptide substrate
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How the flexibility of human histone deacetylases influences ligand binding: an overview
2015 · External reference
Epigenetic molecular recognition: a biomolecular modeling perspective
10.1002/cmdc.201300510 · 2014 · External reference
Insight into the key interactions of bromodomain inhibitors based on molecular docking, interaction fingerprinting, molecular dynamics and binding free energy calculation
10.1039/c4mb00723a · 2015 · External reference
Inhibition and mechanism of HDAC8 revisited
2014 · External reference
Docking ligands into flexible and solvated macromolecules. 6. Development and application to the docking of HDACs and other zinc metalloenzymes inhibitors
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Computational exploration of zinc binding groups for HDAC inhibition
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De novo peptide design and experimental validation of histone methyltransferase inhibitors
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10.1016/j.molmed.2013.08.006
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Nature or nurture: let food Be your epigenetic medicine in chronic inflammatory disorders
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Cancer cell metabolism, epigenetics and the potential influence of dietary components — a perspective
2012 · External reference
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