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References from Clinical Mass Spectrometry in the Bioinformatics Era: A Hitchhiker’s Guide. Local targets link to admitted publications; unresolved targets remain external evidence.
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The identification of urinary acids by coupled gas chromatography-mass spectrometry
10.1016/0009-8981(71)90329-9 · 1971 · External reference
Urinary phenolic acids in tyrosinemia. Identification and quantitation by gas chromatography-mass spectrometry
10.1016/0009-8981(71)90064-7 · 1971 · External reference
Gas chromatograph-mass spectrometer-computer system for detection and indentification of abnormal metabolic products in physiological fluids
10.1093/clinchem/17.8.789 · 1971 · External reference
Separation and identification of neutral and acidic metabolites in cerebrospinal fluid
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Rapid gas chromatographic measurement of plasma procainamide concentration
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Use of stable isotopes in measuring low concentrations of drugs and drug metabolites by GC-MS-COM procedures
10.1093/clinchem/19.8.845 · 1973 · External reference
Routine use of a flexible gas chromatograph-mass spectrometer-computer system to identify drugs and their metabolites in body fluids of overdose victims
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Isolation of drugs and drug metabolites from biological fluids by use of salt-solvent pairs
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Identification of misused drugs in the clinical laboratory. I. Tricyclics
10.1016/s0009-9120(80)90482-8 · 1980 · External reference
Identification of misused drugs in the clinical laboratory
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Identification of dangerous drugs by mass spectrometry
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Radioimmunoassay
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Statistical quality control and routine data processing for radioimmunoassays and immunoradiometric assays
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The polymerase chain reaction. History, methods, and applications
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Radioimmunoassay and lipid-chromatographic analysis for free cortisol in urine compared with isotope dilution--mass spectrometry
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Isotope dilution--mass spectrometry of thyroxin proposed as a reference method
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Fatty acid composition of bacteria as a chemotaxonomic criterion
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Electrospray ionization mass spectrometry: How it all began
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Nobel Prize in Chemistry
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Protein and polymer analyses up to m/z 100 000 by laser ionization time-of-flight mass spectrometry
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Electrospray interface for liquid chromatographs and mass spectrometers
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Mass spectrometry with ion sources operating at atmospheric pressure
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1990 · External reference
Combined capillary gas chromatography/atmospheric pressure negative chemical ionization/mass spectrometry for the determination of 2, 3, 7, 8-tetrachlorodibenzo-p-dioxin in tissue
10.1021/ac50064a011 · 1980 · External reference
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10.1016/0168-1176(90)85063-8 · 1990 · External reference
A mass spectrometer for isotope and gas analysis
10.1063/1.1740961 · 1947 · External reference
Total cross sections for ionization by electron impact
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Unresolved reference
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Electrified droplet fission and the Rayleigh limit
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10.1016/s0003-2670(99)00598-x
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Unresolved reference
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Ionization and transmission efficiency in an electrospray ionization-mass spectrometry interface
10.1016/j.jasms.2007.05.018 · 2007 · External reference
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10.1021/ac00208a002 · 1990 · External reference
10.1016/s1044-0305(03)00128-4
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Matrix-assisted ultraviolet laser desorption of non-volatile compounds
10.1016/0168-1176(87)87041-6 · 1987 · External reference
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10.1016/j.aca.2006.08.062 · 2007 · External reference
Ion formation mechanisms in UV-MALDI
10.1039/b605646f · 2006 · External reference
A Thermal Mechanism of Ion Formation in MALDI
10.1146/annurev-anchem-081413-024102 · 2015 · External reference
Formation of metal-related ions in matrix-assisted laser desorption ionization
10.1007/s13361-016-1424-y · 2016 · External reference
Ion yields in the coupled chemical and physical dynamics model of matrix-assisted laser desorption/ionization
10.1007/s13361-015-1225-8 · 2015 · External reference
MALDI ionization mechanisms investigated by comparison of isomers of dihydroxybenzoic acid
10.1002/jms.3725 · 2016 · External reference
Observation of molecular ions and analysis of nonpolar compounds with the direct analysis in real time ion source
10.1021/ac8022108 · 2008 · External reference
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10.1021/cr990077+ · 2001 · External reference
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10.1016/j.clinbiochem.2010.08.018 · External reference
Electrospray ionisation mass spectrometry: principles and clinical applications
2003 · External reference
Recent developments in liquid chromatography—impact on qualitative and quantitative performance
10.1016/j.chroma.2006.11.014 · 2007 · External reference
The quadrupole mass filter: basic operating concepts
10.1021/ed063p617 · 1986 · External reference
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Applications of the Mathieu equation
10.1119/1.18290 · 1996 · External reference
Linear quadrupoles in mass spectrometry
10.1002/mas.20249 · 2009 · External reference
New ion-optical devices utilizing oscillatory electric fields. IV. Computer simulations of the transport of an ion beam through an ideal quadrupole, hexapole, and octopole operating in the rf-only mode
10.1016/0168-1176(86)80004-0 · 1986 · External reference
10.1016/s1044-0305(97)00027-5
10.1016/s1044-0305(97)00027-5 · External reference
Kinetic energy discrimination in collision/reaction cell ICP-MS: Theoretical review of principles and limitations
10.1016/j.sab.2015.05.008 · 2015 · External reference
Enhanced resolution triple-quadrupole mass spectrometry for fast quantitative bioanalysis using liquid chromatography/tandem mass spectrometry: investigations of parameters that affect ruggedness
10.1002/rcm.872 · 2003 · External reference
Unresolved reference
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Implementation of liquid chromatography/mass spectrometry into the clinical laboratory
10.1016/j.cca.2012.10.026 · 2013 · External reference
A pulsed mass spectrometer with time dispersion
10.1063/1.1770801 · 1953 · External reference
Design and performance of a reflectron based time-of-flight secondary ion mass spectrometer with electrodynamic primary ion mass separation
10.1116/1.574781 · 1987 · External reference
10.1080/05704920902717872
10.1080/05704920902717872 · External reference
Mass resolution improvement by incorporation of pulsed ion extraction in a matrix-assisted laser desorption/ionization linear time-of-flight mass spectrometer
10.1021/ac00109a015 · 1995 · External reference
10.1007/s11356-015-5667-0
10.1007/s11356-015-5667-0 · External reference
Feasibility of ultra-performance liquid chromatography–ion mobility–time-of-flight mass spectrometry in analyzing oxysterols
10.1016/j.chroma.2017.01.039 · 2017 · External reference
Application of ultrahigh-performance liquid chromatography–quadrupole time-of-flight mass spectrometry for the characterization of organic aerosol: Searching for naphthenic acids
10.1016/j.chroma.2017.06.067 · 2017 · External reference
Application of LC-time-of-flight and orbitrap-MS/MS for pesticide residues in fruits and vegetables
2016 · External reference
Unresolved reference
2016 · External reference
An introduction to quadrupole ion trap mass spectrometry
10.1002/(sici)1096-9888(199704)32:4<351::aid-jms512>3.0.co;2-y · 1997 · External reference
Ion trap mass spectrometry of externally generated ions
10.1021/ac00085a001 · 1994 · External reference
10.1002/mas.20250
10.1002/mas.20250 · External reference
The quadrupole ion trap mass spectrometer—a small solution to a big challenge
10.1006/abio.1996.9877 · 1997 · External reference
Mass shifts and local space charge effects observed in the quadrupole ion trap at higher resolution
10.1016/0168-1176(95)04152-b · 1995 · External reference
Low mass cutoff evasion with q(z) value optimization in ion trap
10.1016/j.ab.2009.01.005 · 2009 · External reference
An introduction to hybrid ion trap/time-of-flight mass spectrometry coupled with liquid chromatography applied to drug metabolism studies
10.1002/jms.3126 · 2012 · External reference
Electrostatic axially harmonic orbital trapping: a high-performance technique of mass analysis
10.1021/ac991131p · 2000 · External reference
The Orbitrap: a new mass spectrometer
10.1002/jms.856 · 2005 · External reference
Unresolved reference
2013 · External reference
10.1002/mas.20013
10.1002/mas.20013 · External reference
Performance evaluation of a hybrid linear ion trap/orbitrap mass spectrometer
10.1021/ac0518811 · 2006 · External reference
10.1007/s00216-016-9448-5
10.1007/s00216-016-9448-5 · External reference
Proteomics on an Orbitrap benchtop mass spectrometer using all-ion fragmentation
10.1074/mcp.m110.001537 · 2010 · External reference
10.1126/science.7280693
10.1126/science.7280693 · External reference
Tandem mass spectrometry: dissociation of ions by collisional activation
10.1002/1096-9888(200009)35:9<1069::aid-jms54>3.0.co;2-c · 2000 · External reference
10.1002/jms.703
10.1002/jms.703 · External reference
10.1016/1044-0305(92)85001-z
10.1016/1044-0305(92)85001-z · External reference
New scan modes accessed with a hybrid mass spectrometer
10.1021/ac00291a039 · 1985 · External reference
Introduction to quantitative liquid chromatography-tandem mass spectrometry (LC-MS-MS)
10.1007/bf02492124 · 2003 · External reference
Charge competition and the linear dynamic range of detection in electrospray ionization mass spectrometry1 1Published online August 27
10.1016/j.jasms.2004.04.034 · 2004 · External reference
Diagnosis of inborn errors of metabolism from blood spots by acylcarnitines and amino acids profiling using automated electrospray tandem mass spectrometry
10.1203/00006450-199509000-00009 · 1995 · External reference
Identification and determination of glucuronides and their aglycones in Erigeron breviscapus by liquid chromatography–tandem mass spectrometry
10.1016/s0021-9673(01)01111-6 · 2001 · External reference
Rapid screening and characterization of drug metabolites using a new quadrupole–linear ion trap mass spectrometer
10.1002/jms.420 · 2003 · External reference
Performance of the matrix-assisted laser desorption ionization time-of-flight mass spectrometry system for rapid identification of streptococci: a review
10.1007/s10096-016-2879-2 · 2017 · External reference
10.2217/fmb.13.150
10.2217/fmb.13.150 · External reference
Performance of MALDI-TOF MS platforms for fungal identification
10.1111/myc.12506 · 2016 · External reference
MALDI-TOF MS in clinical parasitology: applications, constraints and prospects
10.1017/s0031182016001189 · 2016 · External reference
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry, a revolution in clinical microbial identification
2010 · External reference
Comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level
10.1128/jcm.01881-09 · 2010 · External reference
A simple and safe protocol for preparing Brucella samples for matrix-assisted laser desorption ionization-time of flight mass spectrometry analysis
10.1128/jcm.02730-15 · 2016 · External reference
MALDI-TOF mass spectrometry compatible inactivation method for highly pathogenic microbial cells and spores
10.1021/ac701822j · 2008 · External reference
Matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification of Burkholderia pseudomallei: importance of expanding databases with pathogens endemic to different localities
10.1128/jcm.01349-12 · 2012 · External reference
Matrix-assisted laser desorption ionization time-of-flight mass spectrometry for rapid identification of mold and yeast cultures of Penicillium marneffei
10.1186/s12866-016-0656-0 · 2016 · External reference
Formic acid-based direct, on-plate testing of yeast and Corynebacterium species by Bruker Biotyper matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.01045-12 · 2012 · External reference
Comparison of heat inactivation and cell disruption protocols for identification of mycobacteria from solid culture media by use of vitek matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.02612-13 · 2013 · External reference
Identification of mycobacteria from solid and liquid media by matrix-assisted laser desorption ionization-time of flight mass spectrometry in the clinical laboratory
10.1128/jcm.00819-13 · 2013 · External reference
Misidentification of Aspergillus nomius and Aspergillus tamarii as Aspergillus flavus: characterization by internal transcribed spacer, β-Tubulin, and calmodulin gene sequencing, metabolic fingerprinting, and matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.03258-13 · 2014 · External reference
Gordonia hongkongensis sp. nov., isolated from blood culture and peritoneal dialysis effluent of patients in Hong Kong
10.1099/ijsem.0.001292 · 2016 · External reference
A novel MLST sequence type discovered in the first fatal case of Laribacter hongkongensis bacteremia clusters with the sequence types of other human isolates
2014 · External reference
10.1016/j.diagmicrobio.2013.10.019
10.1016/j.diagmicrobio.2013.10.019 · External reference
Automated identification of medically important bacteria by 16S rRNA gene sequencing using a novel comprehensive database, 16SpathDB
10.1128/jcm.02350-10 · 2011 · External reference
Tsukamurella serpentis sp. nov., isolated from the oral cavity of Chinese cobras (Naja atra)
10.1099/ijsem.0.001187 · 2016 · External reference
Tsukamurella hongkongensis sp. nov. and Tsukamurella sinensis sp. nov., isolated from patients with keratitis, catheter-related bacteraemia and conjunctivitis
10.1099/ijsem.0.000733 · 2016 · External reference
10.1007/s13238-013-3050-9
10.1007/s13238-013-3050-9 · External reference
Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories
2008 · External reference
Standardization of LC-MS for therapeutic drug monitoring of tacrolimus
10.1373/clinchem.2013.209114 · 2013 · External reference
US Food and Drug Administration perspectives on clinical mass spectrometry
10.1373/clinchem.2015.244731 · 2016 · External reference
10.1373/clinchem.2015.238626
10.1373/clinchem.2015.238626 · External reference
Total laboratory automation and matrix-assisted laser desorption ionization-time of flight mass spectrometry improve turnaround times in the clinical microbiology laboratory: a retrospective analysis
10.1128/jcm.01242-17 · 2018 · External reference
MALDI-TOF MS for identification of Tsukamurella species: Tsukamurella tyrosinosolvens as the predominant species associated with ocular infections
2018 · External reference
Comparison of the Vitek MS and bruker matrix-assisted laser desorption ionization-time of flight mass spectrometry systems for identification of Rhodococcus equi and Dietzia spp
10.1128/jcm.00377-17 · 2017 · External reference
Species-level identification of Actinomyces isolates causing invasive infections: multiyear comparison of Vitek MS (matrix-assisted laser desorption ionization-time of flight mass spectrometry) to partial sequencing of the 16S rRNA gene
10.1128/jcm.02872-15 · 2016 · External reference
Report of the ad hoc committee on reconciliation of approaches to bacterial systematics
10.1099/00207713-37-4-463 · 1987 · External reference
10.1073/pnas.74.11.5088
10.1073/pnas.74.11.5088 · External reference
Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms
10.1073/pnas.95.6.3140 · 1998 · External reference
10.1128/jb.183.17.5025-5040.2001
10.1128/jb.183.17.5025-5040.2001 · External reference
MALDI-TOF MS profiling approach: how much can we get from it?
10.3389/fpls.2015.00184 · 2015 · External reference
The groEL gene is a promising target for species-level identification of Tsukamurella
10.1128/jcm.02260-16 · 2017 · External reference
Seronegative bacteremic melioidosis caused by Burkholderia pseudomallei with ambiguous biochemical profile: clinical importance of accurate identification by 16S rRNA gene and groEL gene sequencing
10.1128/jcm.41.8.3973-3977.2003 · 2003 · External reference
Single gene target bacterial identification groEL gene sequencing for discriminating clinical isolates of Burkholderia pseudomallei and Burkholderia thailandensis
2002 · External reference
Search for a “Tree of Life” in the thicket of the phylogenetic forest
10.1186/jbiol159 · 2009 · External reference
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
10.1093/bioinformatics/btu033 · 2014 · External reference
10.1093/sysbio/syq010
10.1093/sysbio/syq010 · External reference
10.1093/sysbio/sys029
10.1093/sysbio/sys029 · External reference
Matrix-assisted laser desorption ionization-time of flight (maldi-tof) mass spectrometry for detection of antibiotic resistance mechanisms: from research to routine diagnosis
10.1128/cmr.00058-12 · 2013 · External reference
Quantitative matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid resistance detection
10.1128/jcm.01872-14 · 2014 · External reference
Microscopic observation drug susceptibility assay, a rapid, reliable diagnostic test for multidrug-resistant tuberculosis suitable for use in resource-poor settings
10.1128/jcm.42.10.4432-4437.2004 · 2004 · External reference
Using matrix-assisted laser desorption ionization-time of flight mass spectrometry to detect carbapenem resistance within 1 to 2.5 hours
10.1128/jcm.00287-11 · 2011 · External reference
Efficient detection of carbapenemase activity in Enterobacteriaceae by matrix-assisted laser desorption ionization-time of flight mass spectrometry in less than 30 minutes
10.1128/jcm.03467-14 · 2015 · External reference
Unresolved reference
External reference
Detection of carbapenemase activity directly from blood culture vials using MALDI-TOF MS: a quick answer for the right decision
10.1093/jac/dku094 · 2014 · External reference
10.1021/ac300855z
10.1021/ac300855z · External reference
Differentiation of cfiA-negative and cfiA-positive Bacteroides fragilis isolates by matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.02321-10 · 2011 · External reference
Rapid detection of carbapenemase activity through monitoring ertapenem hydrolysis in Enterobacteriaceae with LC-MS/MS
10.4155/bio.12.310 · 2013 · External reference
LC-MS/MS: a rapid and simple new method for the determination of carbapenem β-lactamases
10.4238/2015.november.18.8 · 2015 · External reference
10.1016/j.cca.2015.08.027
10.1016/j.cca.2015.08.027 · External reference
Use of MALDI Biotyper plus ClinProTools mass spectra analysis for correct identification of Streptococcus pneumoniae and Streptococcus mitis/oralis
10.1136/jclinpath-2014-202818 · 2015 · External reference
Phylogenomic analyses and reclassification of species within the genus Tsukamurella: insights to species definition in the post-genomic era
2016 · External reference
Identification of Escherichia coli and Shigella species from whole-genome sequences
10.1128/jcm.01790-16 · 2017 · External reference
A phylogenomic analysis of Escherichia coli/Shigella group: implications of genomic features associated with pathogenicity and ecological adaptation
10.1186/1471-2148-12-174 · 2012 · External reference
10.1007/s00248-010-9717-3
10.1007/s00248-010-9717-3 · External reference
10.1073/pnas.1105168108
10.1073/pnas.1105168108 · External reference
Novel approach for differentiating Shigella species and Escherichia coli by matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.01526-13 · 2013 · External reference
Biomarker- and similarity coefficient-based approaches to bacterial mixture characterization using matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS)
10.1038/srep15834 · 2015 · External reference
Automatic identification of mixed bacterial species fingerprints in a MALDI-TOF mass-spectrum
10.1093/bioinformatics/btu022 · 2014 · External reference
Direct bacterial identification in positive blood cultures by use of two commercial matrix-assisted laser desorption ionization-time of flight mass spectrometry systems
10.1128/jcm.03259-12 · 2013 · External reference
Direct identification of urinary tract pathogens from urine samples, combining urine screening methods and matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.02832-15 · 2016 · External reference
Direct identification of urinary tract pathogens from urine samples using the Vitek MS system based on matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.3343/alm.2015.35.4.416 · 2015 · External reference
Urinary cortisol analysed By Lcms/ms and corrected by creatinine
2015 · External reference
Plasma renin activity by LC-MS/MS: development of a prototypical clinical assay reveals a subpopulation of human plasma samples with substantial peptidase activity
10.1373/clinchem.2010.146449 · 2010 · External reference
Combination of LC–MS/MS aldosterone and automated direct renin in screening for primary aldosteronism
10.1016/j.cca.2014.03.015 · 2014 · External reference
Measurement of urinary metadrenaline and normetadrenaline by liquid chromatography tandem mass spectrometry for the diagnosis of phaeochromocytoma
10.1258/acb.2010.010060 · 2010 · External reference
High-sensitivity tandem mass spectrometry assay for serum estrone and estradiol
10.1309/lc03bhq5xjpjyekg · 2008 · External reference
Development of a rapid, sensitive and authentic LCMS method for the determination of Dexamethasone, Testosterone and Estrone (E1) in human plasma
2013 · External reference
Unresolved reference
2012 · External reference
Simultaneous quantification of sirolimus, everolimus, tacrolimus and cyclosporine by liquid chromatography-mass spectrometry (LC-MS)
10.1515/cclm.2002.045 · 2002 · External reference
Development of a broad toxicological screening technique for urine using ultra-performance liquid chromatography and time-of-flight mass spectrometry
10.1016/j.aca.2009.06.068 · 2009 · External reference
Development of a broad toxicological screening technique for urine using ultra-performance liquid chromatography and time-of-flight mass spectrometry
10.1016/j.aca.2009.06.068 · 2009 · External reference
Multi-analyte procedures for screening for and quantification of drugs in blood, plasma, or serum by liquid chromatography-single stage or tandem mass spectrometry (LC-MS or LC-MS/MS) relevant to clinical and forensic toxicology
10.1016/j.clinbiochem.2005.01.014 · 2005 · External reference
Uniform solid-phase extraction procedure for toxicological drug screening in serum and urine by HPLC with photodiode-array detection
10.1093/clinchem/43.2.312 · 1997 · External reference
Comparison of new solid-phase extraction methods for chromatographic identification of drugs in clinical toxicological analysis
10.1016/s0009-9120(96)00096-3 · 1996 · External reference
Identification of a novel vardenafil analogue in herbal product
10.1016/j.jpba.2007.12.004 · 2008 · External reference
Methods for urine drug testing using one-step dilution and direct injection in combination with LC–MS/MS and LC–HRMS
10.4155/bio.14.192 · 2014 · External reference
Liquid chromatography with tandem mass spectrometry for the simultaneous identification and quantification of cardiovascular drugs applied to the detection of substandard and falsified drugs
10.1002/jssc.201401301 · 2015 · External reference
Liquid chromatography/electrospray ionization mass spectrometry method for the quantification of valproic acid in human plasma
10.1002/rcm.2012 · 2005 · External reference
Isotopic pattern and accurate mass determination in urine drug screening by liquid chromatography/time-of-flight mass spectrometry
10.1002/rcm.2429 · 2006 · External reference
Rapid diagnosis of maple syrup urine disease in blood spots from newborns by tandem mass spectrometry
10.1093/clinchem/41.1.62 · 1995 · External reference
Rapid diagnosis of homocystinuria and other hypermethioninemias from newborns’ blood spots by tandem mass spectrometry
10.1093/clinchem/42.3.349 · 1996 · External reference
Rapid diagnosis of phenylketonuria by quantitative analysis for phenylalanine and tyrosine in neonatal blood spots by tandem mass spectrometry
10.1093/clinchem/39.1.66 · 1993 · External reference
10.1056/nejmoa025225
10.1056/nejmoa025225 · External reference
Tandem mass spectrometric analysis for amino, organic, and fatty acid disorders in newborn dried blood spots
10.1093/clinchem/47.11.1945 · 2001 · External reference
10.1053/j.semperi.2015.03.002
10.1053/j.semperi.2015.03.002 · External reference
Newborn screening for Tyrosinemia type 1 using succinylacetone–a systematic review of test accuracy
10.1186/s13023-017-0599-z · 2017 · External reference
Current and future use of “dried blood spot” analyses in clinical chemistry
10.1515/cclm-2013-0228 · 2013 · External reference
10.1002/mas.21441
10.1002/mas.21441 · External reference
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