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References from Computational identification of vesicular transport proteins from sequences using deep gated recurrent units architecture. Local targets link to admitted publications; unresolved targets remain external evidence.
Pseudo amino acid composition and its applications in bioinformatics, proteomics and system biology
10.2174/157016409789973707 · 2009 · External reference
UbiSitePred: a novel method for improving the accuracy of ubiquitination sites prediction by using LASSO to select the optimal Chou's pseudo components
10.1016/j.chemolab.2018.11.012 · 2019 · External reference
10.1006/jmbi.1999.3091
10.1006/jmbi.1999.3091 · External reference
Prediction of FAD binding sites in electron transport proteins according to efficient radial basis function networks and significant amino acid pairs
10.1186/s12859-016-1163-x · 2016 · External reference
AAindex: amino acid index database
10.1093/nar/28.1.374 · 2000 · External reference
10.1016/j.omtn.2018.07.004
10.1016/j.omtn.2018.07.004 · External reference
Incorporating deep learning with convolutional neural networks and position specific scoring matrices for identifying electron transport proteins
10.1002/jcc.24842 · 2017 · External reference
Prediction of human protein subcellular localization using deep learning
10.1016/j.jpdc.2017.08.009 · 2018 · External reference
10.1016/j.ab.2018.06.011
10.1016/j.ab.2018.06.011 · External reference
10.1146/annurev.neuro.20.1.125
10.1146/annurev.neuro.20.1.125 · External reference
10.1136/jmg.2007.050294
10.1136/jmg.2007.050294 · External reference
Membrane traffic and disease
2001 · External reference
10.1093/jb/mvj121
10.1093/jb/mvj121 · External reference
10.1016/j.nurt.2007.08.002
10.1016/j.nurt.2007.08.002 · External reference
Golgi and related vesicle proteomics: simplify to identify
2011 · External reference
Large scale protein identification in intracellular aquaporin-2 vesicles from renal inner medullary collecting duct
10.1074/mcp.m500049-mcp200 · 2005 · External reference
10.1038/emboj.2009.379
10.1038/emboj.2009.379 · External reference
10.1016/0092-8674(89)90239-0
10.1016/0092-8674(89)90239-0 · External reference
Gene expression profiling separates chromophobe renal cell carcinoma from oncocytoma and identifies vesicular transport and cell junction proteins as differentially expressed genes
10.1158/1078-0432.ccr-06-1268 · 2006 · External reference
TCDB the transporter classification database for membrane transport protein analyses and information
10.1093/nar/gkj001 · 2006 · External reference
A chloroplast-localized vesicular transport system: a bio-informatics approach
10.1186/1471-2164-5-40 · 2004 · External reference
10.1371/journal.pone.0104423
10.1371/journal.pone.0104423 · External reference
10.1091/mbc.e07-03-0193
10.1091/mbc.e07-03-0193 · External reference
10.1093/molbev/msn151
10.1093/molbev/msn151 · External reference
SNARE-CNN: a 2D convolutional neural network architecture to identify SNARE proteins from high-throughput sequencing data
10.7717/peerj-cs.177 · 2019 · External reference
10.1371/journal.pone.0202652
10.1371/journal.pone.0202652 · External reference
ET-GRU: using multi-layer gated recurrent units to identify electron transport proteins
10.1186/s12859-019-2972-5 · 2019 · External reference
Fertility-GRU: identifying fertility-related proteins by incorporating deep-gated recurrent units and original position-specific scoring matrix profiles
2019 · External reference
A deep recurrent neural network discovers complex biological rules to decipher RNA protein-coding potential
10.1093/nar/gky567 · 2018 · External reference
UniProt: a hub for protein information
10.1093/nar/gku989 · 2014 · External reference
10.1038/75556
10.1038/75556 · External reference
10.1093/nar/25.17.3389
10.1093/nar/25.17.3389 · External reference
10.1016/j.csbj.2018.12.005
10.1016/j.csbj.2018.12.005 · External reference
10.1016/j.csbj.2019.01.008 · Admitted local publication
Incorporating post translational modification information for enhancing the predictive performance of membrane transport proteins
10.1016/j.compbiolchem.2018.10.010 · 2018 · External reference
Unresolved reference
2016 · External reference
10.1016/j.csbj.2018.12.002
10.1016/j.csbj.2018.12.002 · External reference
Long short-term memory RNN for biomedical named entity recognition
10.1186/s12859-017-1868-5 · 2017 · External reference
Unresolved reference
External reference
Dropout: a simple way to prevent neural networks from overfitting
2014 · External reference
10.1016/j.ab.2019.02.017
10.1016/j.ab.2019.02.017 · External reference
The elements of statistical learning
2001 · External reference
10.1002/prot.1035
10.1002/prot.1035 · External reference
10.1613/jair.953
10.1613/jair.953 · External reference
Exploratory undersampling for class-imbalance learning
10.1109/tsmcb.2008.2007853 · 2009 · External reference
Imbalanced deep learning by minority class incremental rectification
2018 · External reference
10.1016/j.ab.2019.03.017
10.1016/j.ab.2019.03.017 · External reference
A fuzzy k-nearest neighbor algorithm
10.1109/tsmc.1985.6313426 · 1985 · External reference
Classification and regression by randomForest
2002 · External reference
Support vector machines
10.1109/5254.708428 · 1998 · External reference
10.1186/s13059-016-1037-6
10.1186/s13059-016-1037-6 · External reference