Research graph
References from Deep learning predicts microbial interactions from self-organized spatiotemporal patterns. Local targets link to admitted publications; unresolved targets remain external evidence.
Cross-biome patterns in soil microbial respiration predictable from evolutionary theory on thermal adaptation
10.1038/s41559-018-0771-4 · 2019 · External reference
Soil respiration and the global carbon cycle
10.1023/a:1006247623877 · 2000 · External reference
Soil biofilms: microbial interactions, challenges, and advanced techniques for ex-situ characterization
2019 · External reference
Micro-scale determinants of bacterial diversity in soil
2013 · External reference
Microbial interactions and community assembly at microscales
10.1016/j.mib.2016.03.015 · 2016 · External reference
Deciphering links between bacterial interactions and spatial organization in multispecies biofilms
10.1038/s41396-019-0494-9 · 2019 · External reference
Systems-level analysis of microbial community organization through combinatorial labeling and spectral imaging
2011 · External reference
Live imaging of root-bacteria interactions in a microfluidics setup
10.1073/pnas.1618584114 · 2017 · External reference
A microfluidics-based in situ chemotaxis assay to study the behaviour of aquatic microbial communities
10.1038/s41564-017-0010-9 · 2017 · External reference
Spatial ecology of bacteria at the microscale in soil
2014 · External reference
Mathematical modeling of microbial community dynamics: A methodological review
2014 · External reference
Microbial interactions: From networks to models
2012 · External reference
Minimal interspecies interaction adjustment (MIIA): Inference of neighbor-dependent interactions in microbial communities
2019 · External reference
Prediction of Neighbor-dependent Microbial Interactions from Limited Population Data
2020 · External reference
Deep Learning – whole book
2016 · External reference
Unresolved reference
2016 · External reference
Human-level control through deep reinforcement learning
2015 · External reference
Deep learning
10.1038/nature14539 · 2015 · External reference
A primer on deep learning in genomics
2019 · External reference
A guide to deep learning in healthcare
10.1038/s41591-018-0316-z · 2019 · External reference
Deep learning and process understanding for data-driven Earth system science
10.1038/s41586-019-0912-1 · 2019 · External reference
10.1099/mic.0.000617
10.1099/mic.0.000617 · External reference
Advancing microbial sciences by individual-based modelling
10.1038/nrmicro.2016.62 · 2016 · External reference
Individual-based model of microbial life on hydrated rough soil surfaces
2016 · External reference
Cell-to-cell bacterial interactions promoted by drier conditions on soil surfaces
2018 · External reference
Cellular automaton modeling of biological pattern formation: characterization, applications, and analysis
2005 · External reference
Strong inter-population cooperation leads to partner intermixing in microbial communities
2013 · External reference
Exact stochastic simulation of coupled chemical reactions
10.1021/j100540a008 · 1977 · External reference
A general method for numerically simulating the stochastic time evolution of coupled chemical reactions
10.1016/0021-9991(76)90041-3 · 1976 · External reference
Modeling and simulating chemical reactions
2008 · External reference
Very deep convolutional networks for large-scale image recognition
2015 · External reference
ImageNet classification with deep convolutional neural networks
2012 · External reference
Deep residual learning for image recognition
2016 · External reference
Identity mappings in deep residual networks
2016 · External reference
Unresolved reference
External reference
Batch normalization: accelerating deep network training by reducing internal covariate shift
2015 · External reference
A study of cross-validation and bootstrap for accuracy estimation and model selection
1995 · External reference
A method for stochastic optimization
2015 · External reference
Unresolved reference
External reference
Automatic early stopping using cross validation: quantifying the criteria
10.1016/s0893-6080(98)00010-0 · 1998 · External reference
Trainable system for object detection
10.1023/a:1008162616689 · 2000 · External reference
Rapid object detection using a boosted cascade of simple features
2001 · External reference
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
2006 · External reference
Chromatic bacteria – A broad host-range plasmid and chromosomal insertion toolbox for fluorescent protein expression in bacteria
10.3389/fmicb.2018.03052 · 2018 · External reference
Culture medium for enterobacteria
10.1128/jb.119.3.736-747.1974 · 1974 · External reference
10.1023/a:1010933404324
10.1023/a:1010933404324 · External reference
A microfluidics and agent-based modeling framework for investigating spatial organization in bacterial colonies: the case of Pseudomonas aeruginosa and H1-Type VI secretion interactions
10.3389/fmicb.2018.00033 · 2018 · External reference
How a multi-agent programmable modelling environment like NetLogo can help to deal with communities or assemblages of bacteria on surfaces?
2018 · External reference
10.1128/msystems.00055-19
10.1128/msystems.00055-19 · External reference
Phenotypic responses to interspecies competition and commensalism in a naturally-derived microbial co-culture
10.1038/s41598-017-18630-1 · 2018 · External reference
Unresolved reference
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