Research graph
References from Large inverted repeats identified by intra-specific comparison of mitochondrial genomes provide insights into the evolution of Agrocybe aegerita. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1016/j.tig.2003.10.012
10.1016/j.tig.2003.10.012 · External reference
10.1007/s00253-018-9350-5
10.1007/s00253-018-9350-5 · External reference
Evolutionary inference across eukaryotes identifies specific pressures favoring mitochondrial gene retention
10.1016/j.cels.2016.01.013 · 2016 · External reference
Shared signatures of parasitism and phylogenomics unite Cryptomycota and microsporidia
10.1016/j.cub.2013.06.057 · 2013 · External reference
10.1111/1574-6968.12387
10.1111/1574-6968.12387 · External reference
Rapid mitochondrial genome evolution through invasion of mobile elements in two closely related species of arbuscular mycorrhizal fungi
10.1371/journal.pone.0060768 · 2013 · External reference
Intronic and plasmid-derived regions contribute to the large mitochondrial genome sizes of Agaricomycetes
10.1007/s00294-014-0436-z · 2014 · External reference
10.1371/journal.pone.0156104
10.1371/journal.pone.0156104 · External reference
10.1016/j.tig.2007.01.006
10.1016/j.tig.2007.01.006 · External reference
The complete mitochondrial genome of the Chan-hua fungus Isaria cicadae: a tale of intron evolution in Cordycipitaceae
10.1111/1462-2920.14522 · 2019 · External reference
10.1078/143446103764928495
10.1078/143446103764928495 · External reference
Linear protein-primed replicating plasmids in eukaryotic microbes
10.1007/7171_2007_095 · 2007 · External reference
The 135 kbp mitochondrial genome of Agaricus bisporus is the largest known eukaryotic reservoir of group I introns and plasmid-related sequences
10.1016/j.fgb.2013.01.009 · 2013 · External reference
10.1016/j.mycres.2008.04.014
10.1016/j.mycres.2008.04.014 · External reference
Basidiomycetous fungus Flammulina velutipes harbors two linear mitochondrial plasmids encoding DNA and RNA polymerases
10.1111/j.1574-6968.2000.tb09269.x · 2000 · External reference
Two linear plasmid-like DNA elements simultaneously maintained in Pleurotus ostreatus
10.1016/0167-4781(88)90024-3 · 1988 · External reference
Molecular cloning, sequence and expression of Aa-polB, a mitochondrial gene encoding a family B DNA polymerase from the edible basidiomycete Agrocybe aegerita
10.1007/s004380050994 · 1999 · External reference
Molecular evolution of a mitochondrial polB gene, encoding a family B DNA polymerase, towards the elimination from Agrocybe mitochondrial genomes
10.1007/s00438-004-1050-4 · 2004 · External reference
The mitochondrial genome of the Basidiomycete fungus Pleurotus ostreatus (oyster mushroom)
10.1111/j.1574-6968.2007.01048.x · 2008 · External reference
10.1016/j.gene.2012.05.039
10.1016/j.gene.2012.05.039 · External reference
10.1002/(sici)1097-4644(199610)63:1<1::aid-jcb1>3.0.co;2-3
10.1002/(sici)1097-4644(199610)63:1<1::aid-jcb1>3.0.co;2-3 · External reference
10.1186/1471-2199-12-33
10.1186/1471-2199-12-33 · External reference
Complex analyses of inverted repeats in mitochondrial genomes revealed their importance and variability
10.1093/bioinformatics/btx729 · 2018 · External reference
Comparison of mitochondrial genomes provides insights into intron dynamics and evolution in the caterpillar fungus Cordyceps militaris
10.1016/j.fgb.2015.04.009 · 2015 · External reference
10.1093/gbe/evz165
10.1093/gbe/evz165 · External reference
10.1007/s00253-018-8812-0
10.1007/s00253-018-8812-0 · External reference
Health-beneficial qualities of the edible mushroom Agrocybe aegerita
10.1016/j.foodchem.2007.10.049 · 2008 · External reference
Autophagy inhibits apoptosis induced by agrocybe aegerita lectin in hepatocellular carcinoma
2017 · External reference
Polysaccharides with antioxidative and antiaging activities from enzymatic-extractable mycelium by agrocybe aegerita (Brig.) Sing
2018 · External reference
Inhibition of Leishmania amazonensis arginase by fucogalactan isolated from Agrocybe aegerita mushroom
10.1016/j.carbpol.2018.08.109 · 2018 · External reference
Evolution of mitochondrial SSU-rDNA variable domain sequences and rRNA secondary structures, and phylogeny of the Agrocybe aegerita multispecies complex
10.1016/j.resmic.2006.12.009 · 2007 · External reference
The mitochondrial genome of the basidiomycete Agrocybe aegerita: molecular cloning, physical mapping and gene location
10.1007/bf00351660 · 1992 · External reference
The Agrocybe aegerita mitochondrial genome contains two inverted repeats of the nad4 gene arisen by duplication on both sides of a linear plasmid integration site
10.1016/j.fgb.2007.10.012 · 2008 · External reference
Wide distribution of mitochondrial genome rearrangements in wild strains of the cultivated basidiomycete Agrocybe aegerita
10.1128/aem.61.4.1187-1193.1995 · 1995 · External reference
The complete mitochondrial genome of the Agrocybe aegerita, an edible mushroom
10.1080/23802359.2017.1398618 · 2017 · External reference
10.1101/gr.215087.116
10.1101/gr.215087.116 · External reference
10.1371/journal.pone.0112963
10.1371/journal.pone.0112963 · External reference
10.1089/cmb.2012.0021
10.1089/cmb.2012.0021 · External reference
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
2013 · External reference
10.1093/bioinformatics/btp352
10.1093/bioinformatics/btp352 · External reference
10.1093/bioinformatics/btv362
10.1093/bioinformatics/btv362 · External reference
shinyCircos: an R/Shiny application for interactive creation of Circos plot
10.1093/bioinformatics/btx763 · 2017 · External reference
10.1002/0471250953.bi0203s00
10.1002/0471250953.bi0203s00 · External reference
10.1093/molbev/msy096
10.1093/molbev/msy096 · External reference
10.1093/bioinformatics/btp187
10.1093/bioinformatics/btp187 · External reference
10.1093/nar/22.22.4673
10.1093/nar/22.22.4673 · External reference
10.1093/bioinformatics/btq461
10.1093/bioinformatics/btq461 · External reference
10.1093/bioinformatics/btl158
10.1093/bioinformatics/btl158 · External reference
Palindrome analyser - A new web-based server for predicting and evaluating inverted repeats in nucleotide sequences
10.1016/j.bbrc.2016.09.015 · 2016 · External reference
Ebb and flow of the chloroplast inverted repeat
10.1007/bf02173220 · 1996 · External reference
Long-reads reveal that the chloroplast genome exists in two distinct versions in most plants
2019 · External reference
10.1111/mec.14995
10.1111/mec.14995 · External reference
Enrichment of G4 DNA and a large inverted repeat coincide in the mitochondrial genomes of Termitomyces
10.1093/gbe/evz122 · 2019 · External reference
Structural evolution and flip-flop recombination of chloroplast DNA in the fern genus Osmunda
10.1007/bf00418530 · 1986 · External reference
Circular chloroplast chromosomes: the grand illusion
10.1105/tpc.160771 · 2004 · External reference
Complex analyses of short inverted repeats in all sequenced chloroplast DNAs
10.1155/2018/1097018 · 2018 · External reference
The mitochondrial and plastid genomes of Volvox carteri: bloated molecules rich in repetitive DNA
10.1186/1471-2164-10-132 · 2009 · External reference
Short inverted repeats are hotspots for genetic instability: relevance to cancer genomes
10.1016/j.celrep.2015.02.039 · 2015 · External reference
Preferential recombination between GC clusters in yeast mitochondrial DNA
10.1002/j.1460-2075.1987.tb02767.x · 1987 · External reference