Research graph
References from The mitogenomes of two saprophytic Boletales species ( Coniophora ) reveals intron dynamics and accumulation of plasmid-derived and non-conserved genes. Local targets link to admitted publications; unresolved targets remain external evidence.
Multilocus sequencing reveals multiple geographically structured lineages of Coniophora arida and C. olivacea (Boletales) in North America
10.1080/15572536.2007.11832534 · 2007 · External reference
Comparative genomics of Coniophora olivacea reveals different patterns of genome expansion in Boletales
10.1186/s12864-017-4243-z · 2017 · External reference
Characterisation of the initial degradation stage of Scots pine (Pinus sylvestris L.) sapwood after attack by brown-rot fungus Coniophora puteana
10.1007/s10532-010-9449-6 · 2011 · External reference
10.1073/pnas.1400592111
10.1073/pnas.1400592111 · External reference
10.1126/science.1221748
10.1126/science.1221748 · External reference
10.1038/ng.3223
10.1038/ng.3223 · External reference
10.1038/nrmicro.2016.149
10.1038/nrmicro.2016.149 · External reference
Comparative Mitogenome Analysis Reveals Mitochondrial Genome Differentiation in Ectomycorrhizal and Asymbiotic Amanita Species
10.3389/fmicb.2020.01382 · 2020 · External reference
Comparative Mitochondrial Genome Analysis of Two Ectomycorrhizal Fungi (Rhizopogon) Reveals Dynamic Changes of Intron and Phylogenetic Relationships of the Subphylum Agaricomycotina
2019 · External reference
Comparative mitogenome analysis of two ectomycorrhizal fungi (Paxillus) reveals gene rearrangement, intron dynamics, and phylogeny of basidiomycetes
10.1186/s43008-020-00038-8 · 2020 · External reference
Mitochondria: a historical review
10.1083/jcb.91.3.227s · 1981 · External reference
10.1016/j.cub.2006.06.054
10.1016/j.cub.2006.06.054 · External reference
10.1007/s00439-019-02009-5
10.1007/s00439-019-02009-5 · External reference
Phylogeography of mitochondrial DNA in western Europe
10.1046/j.1469-1809.1998.6230241.x · 1998 · External reference
Higher-level phylogeny of paraneopteran insects inferred from mitochondrial genome sequences
10.1038/srep08527 · 2015 · External reference
Contributions of rpb2 and tef1 to the phylogeny of mushrooms and allies (Basidiomycota, Fungi)
10.1016/j.ympev.2006.08.024 · 2007 · External reference
Biodegradation of phenolic compounds by Basidiomycota and its phenol oxidases: A review
10.1016/j.chemosphere.2016.01.022 · 2016 · External reference
10.1016/j.ijbiomac.2019.08.003
10.1016/j.ijbiomac.2019.08.003 · External reference
The First Mitochondrial Genome for Geastrales (Sphaerobolus stellatus) Reveals Intron Dynamics and Large-Scale Gene Rearrangements of Basidiomycota
1970 · External reference
10.1007/s00253-018-9350-5
10.1007/s00253-018-9350-5 · External reference
10.1371/journal.pone.0107536
10.1371/journal.pone.0107536 · External reference
Comparative mitogenomics reveals large-scale gene rearrangements in the mitochondrial genome of two Pleurotus species
10.1007/s00253-018-9082-6 · 2018 · External reference
The 256 kb mitochondrial genome of Clavaria fumosa is the largest among phylum Basidiomycota and is rich in introns and intronic ORFs
10.1186/s43008-020-00047-7 · 2020 · External reference
10.1186/s13104-016-1900-2
10.1186/s13104-016-1900-2 · External reference
Software for pre-processing Illumina next-generation sequencing short read sequences
10.1186/1751-0473-9-8 · 2014 · External reference
10.1089/cmb.2012.0021
10.1089/cmb.2012.0021 · External reference
10.1093/nar/gkt371
10.1093/nar/gkt371 · External reference
NOVOPlasty: de novo assembly of organelle genomes from whole genome data
2017 · External reference
Characterization and phylogenetic analysis of the complete mitochondrial genome of the medicinal fungus Laetiporus sulphureus
10.1038/s41598-018-27489-9 · 2018 · External reference
10.1093/nar/gku1266
10.1093/nar/gku1266 · External reference
10.1016/j.ympev.2012.08.023
10.1016/j.ympev.2012.08.023 · External reference
Database resources of the National Center for Biotechnology Information
2017 · External reference
Construction of validated, non-redundant composite protein sequence databases
10.1093/protein/3.3.153 · 1990 · External reference
Automated generation of heuristics for biological sequence comparison
10.1186/1471-2105-6-31 · 2005 · External reference
10.1093/nar/gkw413
10.1093/nar/gkw413 · External reference
10.1093/nar/gkt289
10.1093/nar/gkt289 · External reference
10.7717/peerj.3661
10.7717/peerj.3661 · External reference
Evolutionary Software Re-Engineered to Handle Today's Big Data Demands
2016 · External reference
10.1093/molbev/msx248
10.1093/molbev/msx248 · External reference
10.1101/gr.2289704
10.1101/gr.2289704 · External reference
High speed BLASTN: an accelerated MegaBLAST search tool
10.1093/nar/gkv784 · 2015 · External reference
10.1093/nar/27.2.573
10.1093/nar/27.2.573 · External reference
The Agaricus bisporus cox1 gene: the longest mitochondrial gene and the largest reservoir of mitochondrial group i introns
10.1371/journal.pone.0014048 · 2010 · External reference
10.1093/nar/22.22.4673
10.1093/nar/22.22.4673 · External reference
Comparison of the Mitochondrial Genome Sequences of Six Annulohypoxylon stygium Isolates Suggests Short Fragment Insertions as a Potential Factor Leading to Larger Genomic Size
10.3389/fmicb.2018.02079 · 2018 · External reference
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
2017 · External reference
10.1111/j.1096-0031.2010.00329.x
10.1111/j.1096-0031.2010.00329.x · External reference
PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses
2017 · External reference
Characterization of the mitochondrial genomes of three species in the ectomycorrhizal genus Cantharellus and phylogeny of Agaricomycetes
10.1016/j.ijbiomac.2018.06.129 · 2018 · External reference
10.1093/sysbio/sys029
10.1093/sysbio/sys029 · External reference
10.1093/bioinformatics/btu033
10.1093/bioinformatics/btu033 · External reference
The Agaricus bisporus cox1 Gene: The Longest Mitochondrial Gene and the Largest Reservoir of Mitochondrial Group I Introns
10.1371/journal.pone.0014048 · 2010 · External reference
10.1073/pnas.1003391107
10.1073/pnas.1003391107 · External reference
Characterization and comparison of the mitochondrial genomes from two Lyophyllum fungal species and insights into phylogeny of Agaricomycetes
10.1016/j.ijbiomac.2018.10.037 · 2019 · External reference
Mitochondrial DNA of Schizophyllum commune: restriction map, genetic map, and mode of inheritance
10.1007/bf00351472 · 1992 · External reference
Characterization and comparative analysis of six complete mitochondrial genomes from ectomycorrhizal fungi of the Lactarius genus and phylogenetic analysis of the Agaricomycetes
10.1016/j.ijbiomac.2018.10.029 · 2019 · External reference
Characterization and comparative mitogenomic analysis of six newly sequenced mitochondrial genomes from ectomycorrhizal fungi (Russula) and phylogenetic analysis of the Agaricomycetes
2018 · External reference
The 206 kbp mitochondrial genome of Phanerochaete carnosa reveals dynamics of introns, accumulation of repeat sequences and plasmid-derived genes
10.1016/j.ijbiomac.2020.06.142 · 2020 · External reference
The complete mitochondrial genome of medicinal fungus Taiwanofungus camphoratus reveals gene rearrangements and intron dynamics of Polyporales
2020 · External reference
Porcini mushrooms (Boletus sect. Boletus) from China
10.1007/s13225-015-0336-7 · 2016 · External reference
Intronic and plasmid-derived regions contribute to the large mitochondrial genome sizes of Agaricomycetes
10.1007/s00294-014-0436-z · 2014 · External reference
Identification and distribution of sequences having similarity to mitochondrial plasmids in mitochondrial genomes of filamentous fungi
10.1007/s00438-005-1133-x · 2005 · External reference
10.1016/j.mycres.2008.04.014
10.1016/j.mycres.2008.04.014 · External reference
Basidiomycetous fungus Flammulina velutipes harbors two linear mitochondrial plasmids encoding DNA and RNA polymerases
10.1111/j.1574-6968.2000.tb09269.x · 2000 · External reference
Two linear plasmid-like DNA elements simultaneously maintained in Pleurotus ostreatus
1988 · External reference
The 135 kbp mitochondrial genome of Agaricus bisporus is the largest known eukaryotic reservoir of group I introns and plasmid-related sequences
10.1016/j.fgb.2013.01.009 · 2013 · External reference
The Mitochondrial tRNAHis G12192A Mutation May Modulate the Clinical Expression of Deafness-Associated tRNAThr G15927A Mutation in a Chinese Pedigree
10.2174/1566524019666190308121552 · 2019 · External reference
10.1074/jbc.m504247200
10.1074/jbc.m504247200 · External reference
The complete mitochondrial genome of the Chan-hua fungus Isaria cicadae: a tale of intron evolution in Cordycipitaceae
10.1111/1462-2920.14522 · 2019 · External reference
Role of mobile introns in mitochondrial genome diversity of fungi (a mini review)
10.1556/amicr.49.2002.2-3.22 · 2002 · External reference
10.1093/gbe/evu028
10.1093/gbe/evu028 · External reference
Mitochondrial genome rearrangements in glomus species triggered by homologous recombination between distinct mtDNA haplotypes
10.1093/gbe/evt120 · 2013 · External reference
Mitochondrial genome of the nematode endoparasitic fungus Hirsutella vermicola reveals a high level of synteny in the family Ophiocordycipitaceae
10.1007/s00253-017-8257-x · 2017 · External reference
Complete mtDNA sequences of two millipedes suggest a new model for mitochondrial gene rearrangements: duplication and nonrandom loss
10.1093/oxfordjournals.molbev.a004068 · 2002 · External reference
Intraspecific rearrangement of mitochondrial genome suggests the prevalence of the tandem duplication-random loss (TDLR) mechanism in Quasipaa boulengeri
10.1186/s12864-016-3309-7 · 2016 · External reference
Industrial and biotechnological applications of ligninolytic enzymes of the basidiomycota: A review
2010 · External reference
10.1038/nature05110
10.1038/nature05110 · External reference
10.1073/pnas.1117018109
10.1073/pnas.1117018109 · External reference
10.1101/gr.6531807
10.1101/gr.6531807 · External reference
Phylogenetic relationships of ascomycetes and basidiomycetes based on comparative genomics analysis
10.1007/s13258-017-0595-7 · 2017 · External reference
Mitochondrial genome, comparative analysis and evolutionary insights into the entomopathogenic fungus Hirsutella thompsonii
10.1111/1462-2920.14379 · 2018 · External reference
Mitochondrial Genome Polymorphisms in the Human Pathogenic Fungus Cryptococcus neoformans
10.3389/fmicb.2020.00706 · 2020 · External reference
The complete mitochondrial genomes of two model ectomycorrhizal fungi (Laccaria): features, intron dynamics and phylogenetic implications
10.1016/j.ijbiomac.2019.09.188 · 2020 · External reference
