Research graph
References from MyoData: An expression knowledgebase at single cell/nucleus level for the discovery of coding-noncoding RNA functional interactions in skeletal muscle. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1016/j.molcel.2019.02.026
10.1016/j.molcel.2019.02.026 · External reference
Unresolved reference
External reference
10.1007/s00421-010-1545-0
10.1007/s00421-010-1545-0 · External reference
Skeletal muscle fibre plasticity in response to selected environmental and physiological stimuli
2009 · External reference
Transcriptomic Analysis of Single Isolated Myofibers Identifies miR-27a-3p and miR-142-3p as Regulators of Metabolism in Skeletal Muscle
10.1016/j.celrep.2019.02.105 · 2019 · External reference
10.1016/j.semcdb.2017.10.032
10.1016/j.semcdb.2017.10.032 · External reference
Skeletal Muscle MicroRNAs: Their Diagnostic and Therapeutic Potential in Human Muscle Diseases
10.3233/jnd-140058 · 2015 · External reference
10.3390/cells8091107
10.3390/cells8091107 · External reference
Importance of Long Non-coding RNAs in the Development and Disease of Skeletal Muscle and Cardiovascular Lineages
10.3389/fcell.2019.00228 · 2019 · External reference
The function of miR-143, miR-145 and the MiR-143 host gene in cardiovascular development and disease
2019 · External reference
Non-coding RNAs Shaping Muscle
10.3389/fcell.2019.00394 · 2019 · External reference
10.1093/nar/gkz007
10.1093/nar/gkz007 · External reference
10.1101/gad.17446611
10.1101/gad.17446611 · External reference
10.1101/gr.132159.111
10.1101/gr.132159.111 · External reference
Catalogues of mammalian long noncoding RNAs: modest conservation and incompleteness
10.1186/gb-2009-10-11-r124 · 2009 · External reference
10.1073/pnas.0706729105
10.1073/pnas.0706729105 · External reference
10.4161/15384101.2014.977641
10.4161/15384101.2014.977641 · External reference
10.1038/nrg2290
10.1038/nrg2290 · External reference
Long Non-Coding RNAs in the Regulation of Gene Expression: Physiology and Disease. Noncoding
2019 · External reference
Analyzing MiRNA-LncRNA Interactions
10.1007/978-1-4939-3378-5_21 · 2016 · External reference
10.3390/ijms21010302
10.3390/ijms21010302 · External reference
10.1038/s10038-020-00844-3
10.1038/s10038-020-00844-3 · External reference
Dissecting human disease with single-cell omics: application in model systems and in the clinic
10.1242/dmm.036525 · 2018 · External reference
10.1073/pnas.2018391117
10.1073/pnas.2018391117 · External reference
Single-nucleus RNA-seq and FISH identify coordinated transcriptional activity in mammalian myofibers
10.1038/s41467-020-18789-8 · 2020 · External reference
Single-nucleus RNA-seq identifies transcriptional heterogeneity in multinucleated skeletal myofibers
10.1038/s41467-020-20063-w · 2020 · External reference
10.1093/nar/gku1215
10.1093/nar/gku1215 · External reference
Unresolved reference
External reference
10.1093/nar/gkt1248
10.1093/nar/gkt1248 · External reference
Unresolved reference
External reference
10.1093/nar/gkz757
10.1093/nar/gkz757 · External reference
Unresolved reference
External reference
MiRmap: comprehensive prediction of microRNA target repression strength
10.1093/nar/gks901 · 2012 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Unresolved reference
External reference
DIANA-LncBase v2: indexing microRNA targets on non-coding transcripts
10.1093/nar/gkv1270 · 2016 · External reference
metaGraphite-a new layer of pathway annotation to get metabolite networks
10.1093/bioinformatics/bty719 · 2019 · External reference
10.1038/s41592-019-0686-2
10.1038/s41592-019-0686-2 · External reference
Unresolved reference
2010 · External reference
Unresolved reference
External reference
10.25080/tcwv9851
10.25080/tcwv9851 · 2008 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Unresolved reference
External reference
Unresolved reference
External reference
Cytoscape.js: a graph theory library for visualisation and analysis
10.1093/bioinformatics/btv557 · 2016 · External reference
Unresolved reference
External reference
10.1016/j.mito.2015.07.001
10.1016/j.mito.2015.07.001 · External reference
10.1101/gr.1239303
10.1101/gr.1239303 · External reference
10.1371/journal.pbio.0020294
10.1371/journal.pbio.0020294 · External reference
10.1002/hep.25846
10.1002/hep.25846 · External reference
10.1152/physiolgenomics.00050.2017
10.1152/physiolgenomics.00050.2017 · External reference
10.3390/ijms12117950
10.3390/ijms12117950 · External reference
10.1159/000353883
10.1159/000353883 · External reference
Mitochondrial network morphology: building an integrative, geometrical view
10.1186/1741-7007-11-71 · 2013 · External reference
Skeletal Muscle Mitochondrial Bioenergetics and Morphology in High Fat Diet Induced Obesity and Insulin Resistance: Focus on Dietary Fat Source
2015 · External reference
Mitochondrial Quality Control and Muscle Mass Maintenance
2015 · External reference
microRNA-378 promotes autophagy and inhibits apoptosis in skeletal muscle
2018 · External reference
10.1101/gad.1658508
10.1101/gad.1658508 · External reference
10.1371/journal.pbio.2006247
10.1371/journal.pbio.2006247 · External reference
10.1016/j.bbrc.2011.04.074
10.1016/j.bbrc.2011.04.074 · External reference
10.1097/jes.0b013e31821c01e1
10.1097/jes.0b013e31821c01e1 · External reference
Effect of miR-143-3p on C2C12 myoblast differentiation
10.1080/09168451.2015.1123604 · 2016 · External reference
10.1371/journal.pone.0204860
10.1371/journal.pone.0204860 · External reference
MicroRNAs in Skeletal Muscle Aging: Current Issues and Perspectives
10.1093/gerona/gly207 · 2019 · External reference
Altered microRNA expression in skeletal muscle results from high-fat diet-induced insulin resistance in mice
2012 · External reference
Computational analysis identifies a sponge interaction network between long non-coding RNAs and messenger RNAs in human breast cancer
10.1186/1752-0509-8-83 · 2014 · External reference
LncRNA PVT1 regulate expression of HIF1alpha via functioning as ceRNA for miR199a5p in nonsmall cell lung cancer under hypoxia
2018 · External reference
Long Noncoding RNA PVT1 Acts as a “Sponge” to Inhibit microRNA-152 in Gastric Cancer Cells
10.1007/s10620-017-4508-z · 2017 · External reference
10.1002/jcp.29881
10.1002/jcp.29881 · External reference
10.1038/ng1953
10.1038/ng1953 · External reference
MicroRNA-206: the skeletal muscle-specific myomiR
2008 · External reference
10.1002/dvdy.21223
10.1002/dvdy.21223 · External reference
Lactate transporters (MCT proteins) in heart and skeletal muscles
10.1097/00005768-200004000-00010 · 2000 · External reference
10.1016/j.devcel.2009.10.013
10.1016/j.devcel.2009.10.013 · External reference
10.1007/s00401-016-1550-4
10.1007/s00401-016-1550-4 · External reference
Aberrant Autophagic Response in The Muscle of A Knock-in Mouse Model of Spinal and Bulbar Muscular Atrophy
10.1038/srep15174 · 2015 · External reference
10.1007/s10735-014-9596-x
10.1007/s10735-014-9596-x · External reference
10.1093/nar/gkx376
10.1093/nar/gkx376 · External reference
10.2144/000113999
10.2144/000113999 · External reference
mTFkb: a knowledgebase for fundamental annotation of mouse transcription factors
10.1038/s41598-017-02404-w · 2017 · External reference
TF-finder: a software package for identifying transcription factors involved in biological processes using microarray data and existing knowledge base
10.1186/1471-2105-11-425 · 2010 · External reference
10.1371/journal.pone.0215495
10.1371/journal.pone.0215495 · External reference
10.1371/journal.pcbi.1007800
10.1371/journal.pcbi.1007800 · External reference
MuscleAtlasExplorer: a web service for studying gene expression in human skeletal muscle
10.1093/database/baaa111 · 2020 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Unresolved reference
External reference
Transcriptomic profiling of skeletal muscle adaptations to exercise and inactivity
10.1038/s41467-019-13869-w · 2020 · External reference
SGDB: A Sports Gene Database for Visualization of Sports Effects on Human Skeletal Musclr Gene Expression
2020 · External reference
CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
10.1186/1471-2105-11-435 · 2010 · External reference
10.1093/nar/gky1023
10.1093/nar/gky1023 · External reference
10.1371/journal.pone.0125222
10.1371/journal.pone.0125222 · External reference
10.1093/database/baz046
10.1093/database/baz046 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
10.1093/nar/gkaa838
10.1093/nar/gkaa838 · External reference
Unresolved reference
External reference
SCDevDB: A Database for Insights Into Single-Cell Gene Expression Profiles During Human Developmental Processes
10.3389/fgene.2019.00903 · 2019 · External reference
