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References from Predicting host dependency factors of pathogens in Drosophila melanogaster using machine learning. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1371/journal.pcbi.1002164
10.1371/journal.pcbi.1002164 · External reference
10.1073/pnas.0506461102
10.1073/pnas.0506461102 · External reference
10.1073/pnas.0431052100
10.1073/pnas.0431052100 · External reference
10.1126/science.1152725
10.1126/science.1152725 · External reference
10.1016/j.chom.2008.10.004
10.1016/j.chom.2008.10.004 · External reference
10.1016/j.cell.2008.07.032
10.1016/j.cell.2008.07.032 · External reference
10.1038/nrmicro955
10.1038/nrmicro955 · External reference
10.3389/fcimb.2020.00214
10.3389/fcimb.2020.00214 · External reference
10.1371/journal.pone.0011025
10.1371/journal.pone.0011025 · External reference
10.1159/000248649
10.1159/000248649 · External reference
10.1371/journal.ppat.1000954
10.1371/journal.ppat.1000954 · External reference
10.1038/emboj.2011.4
10.1038/emboj.2011.4 · External reference
10.1016/s1473-3099(06)70601-6
10.1016/s1473-3099(06)70601-6 · External reference
10.1016/j.cell.2008.10.007
10.1016/j.cell.2008.10.007 · External reference
10.1371/journal.ppat.1000437
10.1371/journal.ppat.1000437 · External reference
10.1016/j.csbj.2020.02.022 · Admitted local publication
Geptop 2.0: an updated, more precise, and faster Geptop server for identification of prokaryotic essential genes
10.3389/fmicb.2019.01236 · 2019 · External reference
10.1038/89044
10.1038/89044 · External reference
Classification of multiple cancer types by multicategory support vector machines using gene expression data
10.1093/bioinformatics/btg102 · 2003 · External reference
10.1038/sj.leu.2403167
10.1038/sj.leu.2403167 · External reference
10.1038/35090585
10.1038/35090585 · External reference
Coupled two-way clustering analysis of breast cancer and colon cancer gene expression data
10.1093/bioinformatics/btf876 · 2003 · External reference
10.1158/0008-5472.can-15-2350
10.1158/0008-5472.can-15-2350 · External reference
GenomeRNAi: a database for cell-based and in vivo RNAi phenotypes, 2013 update
10.1093/nar/gks1170 · 2013 · External reference
10.1126/science.1116008
10.1126/science.1116008 · External reference
10.1371/journal.ppat.0030155
10.1371/journal.ppat.0030155 · External reference
10.1126/science.1173164
10.1126/science.1173164 · External reference
10.1371/journal.ppat.1000110
10.1371/journal.ppat.1000110 · External reference
10.1073/pnas.0707206105
10.1073/pnas.0707206105 · External reference
Use of a Drosophila model to identify genes regulating Plasmodium growth in the mosquito
10.1534/genetics.108.089748 · 2008 · External reference
10.1371/journal.ppat.1000031
10.1371/journal.ppat.1000031 · External reference
10.1371/journal.pone.0051831
10.1371/journal.pone.0051831 · External reference
Ensembl 2020
2020 · External reference
10.1093/nar/gkz890
10.1093/nar/gkz890 · External reference
BioMart–biological queries made easy
10.1186/1471-2164-10-22 · 2009 · External reference
10.1007/978-3-540-35306-5_10
10.1007/978-3-540-35306-5_10 · External reference
10.1093/bioinformatics/btv042
10.1093/bioinformatics/btv042 · External reference
Unresolved reference
1997 · External reference
Unresolved reference
External reference
10.1371/journal.pgen.1000556
10.1371/journal.pgen.1000556 · External reference
10.1093/nar/gky1131
10.1093/nar/gky1131 · External reference
10.1093/nar/gkl842
10.1093/nar/gkl842 · External reference
10.1093/nar/25.17.3389
10.1093/nar/25.17.3389 · External reference
Unresolved reference
External reference
10.1080/15427951.2013.865686
10.1080/15427951.2013.865686 · External reference
10.1093/bioinformatics/btx431
10.1093/bioinformatics/btx431 · External reference
10.1023/a:1010933404324
10.1023/a:1010933404324 · External reference
Unresolved reference
External reference
10.1111/j.1600-0587.2012.07348.x
10.1111/j.1600-0587.2012.07348.x · External reference
Crucial problems in regression modelling and their solutions
10.1039/b110779h · 2002 · External reference
Scikit-learn: machine learning in python
2011 · External reference
10.1613/jair.953
10.1613/jair.953 · External reference
Unresolved reference
External reference
10.1023/a:1022627411411
10.1023/a:1022627411411 · External reference
10.1073/pnas.79.8.2554
10.1073/pnas.79.8.2554 · External reference
Logistic regression: relating patient characteristics to outcomes
10.1001/jama.2016.7653 · 2016 · External reference
10.1093/nar/gkz369
10.1093/nar/gkz369 · External reference
FlyBase 2.0: the next generation
10.1093/nar/gky1003 · 2018 · External reference
10.1093/nar/gkt1131
10.1093/nar/gkt1131 · External reference
10.1093/nar/gkw1013
10.1093/nar/gkw1013 · External reference
10.1371/journal.pbio.0060224
10.1371/journal.pbio.0060224 · External reference
10.1126/science.1141314
10.1126/science.1141314 · External reference
10.1109/indcon.2011.6139332
10.1109/indcon.2011.6139332 · External reference
N-terminal ubiquitination: more protein substrates join in
10.1016/j.tcb.2004.01.004 · 2004 · External reference
10.1371/journal.ppat.1008220
10.1371/journal.ppat.1008220 · External reference
10.1590/0074-02760150184
10.1590/0074-02760150184 · External reference
Structural biology of the LRRK2 GTPase and kinase domains: implications for regulation
10.3389/fnmol.2014.00032 · 2014 · External reference
10.1084/jem.20170014
10.1084/jem.20170014 · External reference
10.1038/ni.3233
10.1038/ni.3233 · External reference
LRRK2 is a negative regulator of Mycobacterium tuberculosis phagosome maturation in macrophages
10.15252/embj.201798694 · 2018 · External reference
10.1021/acsinfecdis.9b00051
10.1021/acsinfecdis.9b00051 · External reference
10.1038/emboj.2013.10
10.1038/emboj.2013.10 · External reference
10.1080/21541248.2017.1331721
10.1080/21541248.2017.1331721 · External reference
Comparative proteomics of purified pathogen vacuoles correlates intracellular replication of Legionella pneumophila with the small GTPase Ras-related protein 1 (Rap1)
10.1074/mcp.m116.063453 · 2017 · External reference
10.1371/journal.ppat.0020034
10.1371/journal.ppat.0020034 · External reference
10.1016/j.chom.2013.08.001
10.1016/j.chom.2013.08.001 · External reference
TGF-b2 induction regulates invasiveness of Theileria-transformed leukocytes and disease susceptibility
10.1371/journal.ppat.1001197 · 2010 · External reference
Filopodia and membrane blebs drive efficient matrix invasion of macrophages transformed by the intracellular parasite Theileria annulata
10.1371/journal.pone.0075577 · 2013 · External reference
10.1038/nrm2728
10.1038/nrm2728 · External reference
Bacteria and protozoa differentially modulate the expression of Rab proteins
10.1371/journal.pone.0039858 · 2012 · External reference
10.1111/tra.12000
10.1111/tra.12000 · External reference
Golgi-associated Rab14, a new regulator for Chlamydia trachomatis infection outcome
10.4161/cib.16594 · 2011 · External reference
10.1038/sj.emboj.7601407
10.1038/sj.emboj.7601407 · External reference
Rab18 binds to classical swine fever virus NS5A and mediates viral replication and assembly in swine umbilical vein endothelial cells
10.1080/21505594.2020.1767356 · 2020 · External reference
Rab18 is required for viral assembly of hepatitis C virus through trafficking of the core protein to lipid droplets
10.1016/j.virol.2014.05.017 · 2014 · External reference
Rab18 binds to hepatitis C virus NS5A and promotes interaction between sites of viral replication and lipid droplets
10.1371/journal.ppat.1003513 · 2013 · External reference
10.1128/mspheredirect.00291-17
10.1128/mspheredirect.00291-17 · External reference
10.1074/jbc.275.21.16281
10.1074/jbc.275.21.16281 · External reference
N eisseria meningitidis subverts the polarized organization and intracellular trafficking of host cells to cross the epithelial barrier
10.1111/cmi.12439 · 2015 · External reference
10.1016/bs.ircmb.2015.12.005
10.1016/bs.ircmb.2015.12.005 · External reference
10.1111/j.1600-0854.2008.00777.x
10.1111/j.1600-0854.2008.00777.x · External reference
10.1128/mbio.00606-12
10.1128/mbio.00606-12 · External reference
A role for the VPS retromer in Brucella intracellular replication revealed by genomewide siRNA screening
10.1128/msphere.00380-19 · 2019 · External reference
10.1038/nri1980
10.1038/nri1980 · External reference
Exploitation of the Host cell membrane fusion machinery by leishmania is part of the infection process
10.1371/journal.ppat.1005962 · 2016 · External reference
10.1084/jem.20031706
10.1084/jem.20031706 · External reference
10.1080/09687860500143829
10.1080/09687860500143829 · External reference
10.1016/j.tim.2016.02.003
10.1016/j.tim.2016.02.003 · External reference
