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References from Contribution of sample processing to gut microbiome analysis in the model Lepidoptera, silkworm Bombyx mori. Local targets link to admitted publications; unresolved targets remain external evidence.
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Oxytetracycline reduces the diversity of tetracycline-resistance genes in the Galleria mellonella gut microbiome
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The microbiome of the invertebrate model host Galleria mellonella is dominated by Enterococcus
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Census of the bacterial community of the gypsy moth larval midgut by using culturing and culture-independent methods
10.1128/aem.70.1.293-300.2004 · 2004 · External reference
Biodiversity and Activity of the Gut Microbiota across the Life History of the Insect Herbivore Spodoptera littoralis
2016 · External reference
Cascading effects on bacterial communities: cattle grazing causes a shift in the microbiome of a herbivorous caterpillar
10.1038/s41396-018-0102-4 · 2018 · External reference
The generalist inside the specialist: gut bacterial communities of two insect species feeding on toxic plants are dominated by Enterococcus sp.
10.3389/fmicb.2016.01005 · 2016 · External reference
Origin and diversity of metabolically active gut bacteria from laboratory-bred larvae of Manduca sexta (Sphingidae, Lepidoptera, Insecta)
10.1128/aem.01464-08 · 2008 · External reference
Metagenomic sequencing of diamondback moth gut microbiome unveils key holobiont adaptations for herbivory
2017 · External reference
10.1111/1462-2920.13450
10.1111/1462-2920.13450 · External reference
Evidence for a conserved microbiota across the different developmental stages of Plodia interpunctella
10.1111/1744-7917.12551 · 2019 · External reference
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Structure and function of the bacterial and fungal gut microbiota of Neotropical butterflies
10.1002/ecm.1346 · 2019 · External reference
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10.1038/nbt.3960 · External reference
10.1016/j.cell.2018.08.041
10.1016/j.cell.2018.08.041 · External reference
How the 'kitome' influences the characterization of bacterial communities in lepidopteran samples with low bacterial biomass
10.1111/jam.14919 · 2021 · External reference
10.1038/ismej.2013.185
10.1038/ismej.2013.185 · External reference
10.1128/aem.68.7.3401-3407.2002
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Quantitative proteomic analysis of germination of nosema bombycis spores under extremely alkaline conditions
2016 · External reference
Influence of diet, sex, and viral infections on the gut microbiota composition of Spodoptera exigua caterpillars
10.3389/fmicb.2020.00753 · 2020 · External reference
Bacterial microbiota of field-collected Helicoverpa zea (Lepidoptera: Noctuidae) from transgenic Bt and Non-Bt cotton
10.3390/microorganisms9040878 · 2021 · External reference
A Quantitative analysis of growth and size regulation in Manduca sexta: the physiological basis of variation in size and age at metamorphosis
10.1371/journal.pone.0127988 · 2015 · External reference
10.1038/ismej.2015.75
10.1038/ismej.2015.75 · External reference
10.1111/j.1574-6941.2009.00722.x
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Minimization of chloroplast contamination in 16S rRNA gene pyrosequencing of insect herbivore bacterial communities
10.1016/j.mimet.2013.08.007 · 2013 · External reference
Metagenomic analysis of the medicinal leech gut microbiota
10.3389/fmicb.2014.00151 · 2014 · External reference
10.1111/1755-0998.12281
10.1111/1755-0998.12281 · External reference
10.1126/science.1176620
10.1126/science.1176620 · External reference
Insect symbionts as valuable grist for the biotechnological mill: an alkaliphilic silkworm gut bacterium for efficient lactic acid production
10.1007/s00253-018-8953-1 · 2018 · External reference
Identification of metabolically active bacteria in the gut of the generalist Spodoptera littoralis via DNA stable isotope probing using 13C-glucose
2013 · External reference
10.1038/nature12171
10.1038/nature12171 · External reference
Comparative shotgun metagenomic data of the silkworm Bombyx mori gut microbiome
10.1038/sdata.2018.285 · 2018 · External reference
10.1093/bioinformatics/btr507
10.1093/bioinformatics/btr507 · External reference
10.1093/bioinformatics/bty560
10.1093/bioinformatics/bty560 · External reference
Casimicrobium huifangae gen. nov., sp. nov., a Ubiquitous “Most-Wanted” Core bacterial taxon from municipal wastewater treatment plants
10.1128/aem.02209-19 · 2020 · External reference
10.1093/bioinformatics/btq461
10.1093/bioinformatics/btq461 · External reference
10.1093/nar/gkm864
10.1093/nar/gkm864 · External reference
10.1016/j.csbj.2020.01.004 · Admitted local publication
10.1186/s40168-018-0605-2
10.1186/s40168-018-0605-2 · External reference
10.1128/aem.01541-09
10.1128/aem.01541-09 · External reference
Estimating diversity in networked ecological communities
2020 · External reference
PERMANOVA-S: association test for microbial community composition that accommodates confounders and multiple distances
10.1093/bioinformatics/btw311 · 2016 · External reference
Demonstrating microbial co-occurrence pattern analyses within and between ecosystems
10.3389/fmicb.2014.00358 · 2014 · External reference
Optimal extraction methods for the simultaneous analysis of DNA from diverse organisms and sample types
10.1111/1755-0998.12762 · 2018 · External reference
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
10.1186/s12915-014-0087-z · 2014 · External reference
10.1111/ele.12761
10.1111/ele.12761 · External reference
Molecular analysis of jejunal, ileal, caecal and recto-sigmoidal human colonic microbiota using 16S rRNA gene libraries and terminal restriction fragment length polymorphism
10.1099/jmm.0.45935-0 · 2005 · External reference
Probiotic dosing of Ruminococcus flavefaciens affects rumen microbiome structure and function in reindeer
10.1007/s00248-013-0279-z · 2013 · External reference
10.1371/journal.pone.0146313
10.1371/journal.pone.0146313 · External reference
Variability of bacterial communities in the moth Heliothis virescens indicates transient association with the host
10.1371/journal.pone.0154514 · 2016 · External reference
10.1016/j.envint.2020.105886
10.1016/j.envint.2020.105886 · External reference
Bacterial symbionts in lepidoptera: their diversity, transmission, and impact on the host
10.3389/fmicb.2018.00556 · 2018 · External reference
10.1016/j.csbj.2020.11.031 · Admitted local publication
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