Research graph
References from Interpreting a black box predictor to gain insights into early folding mechanisms. Local targets link to admitted publications; unresolved targets remain external evidence.
The protein data bank
10.1093/nar/28.1.235 · 2000 · External reference
Application of an interpretable classification model on Early Folding Residues during protein folding
10.1186/s13040-018-0188-2 · 2019 · External reference
10.1002/prot.340210302
10.1002/prot.340210302 · External reference
Spin glasses and the statistical mechanics of protein folding
10.1073/pnas.84.21.7524 · 1987 · External reference
10.1093/nar/gkaa1038
10.1093/nar/gkaa1038 · External reference
10.1093/nar/gku270
10.1093/nar/gku270 · External reference
10.1177/001316446002000104
10.1177/001316446002000104 · External reference
10.1016/b978-1-55860-377-6.50023-2
10.1016/b978-1-55860-377-6.50023-2 · External reference
10.1002/prot.24309
10.1002/prot.24309 · External reference
10.1016/s0968-0004(02)00012-9
10.1016/s0968-0004(02)00012-9 · External reference
10.1038/nsb0197-10
10.1038/nsb0197-10 · External reference
10.1038/nature02261
10.1038/nature02261 · External reference
10.1073/pnas.1411798111
10.1073/pnas.1411798111 · External reference
Frustration, function and folding
2018 · External reference
Comparing sets of patterns with the Jaccard index
2018 · External reference
Unresolved reference
External reference
10.1126/science.1749933
10.1126/science.1749933 · External reference
Unresolved reference
2020 · External reference
Unresolved reference
2018 · External reference
10.1073/pnas.1305887110
10.1073/pnas.1305887110 · External reference
10.1002/bip.360221211
10.1002/bip.360221211 · External reference
10.1016/j.sbi.2011.09.010
10.1016/j.sbi.2011.09.010 · External reference
Protein folding funnels: a kinetic approach to the sequence-structure relationship
10.1073/pnas.89.18.8721 · 1992 · External reference
10.1110/ps.8.8.1571
10.1110/ps.8.8.1571 · External reference
Interpretable Machine Learning
2019 · External reference
10.1146/annurev.physchem.48.1.545
10.1146/annurev.physchem.48.1.545 · External reference
10.1016/j.bpj.2015.12.028
10.1016/j.bpj.2015.12.028 · External reference
10.1093/nar/gkv1185
10.1093/nar/gkv1185 · External reference
Unresolved reference
1993 · External reference
Exploring the sequence-based prediction of folding initiation sites in proteins
10.1038/s41598-017-08366-3 · 2017 · External reference
Extracting information on folding from the amino acid sequence: accurate predictions for protein regions with preferred conformation in the absence of tertiary interactions
10.1021/bi00157a009 · 1992 · External reference
Extracting information on folding from the amino acid sequence: consensus regions with preferred conformation in homologous proteins
10.1021/bi00157a010 · 1992 · External reference
10.1038/nrm3658
10.1038/nrm3658 · External reference
Partially native intermediates mediate misfolding of SOD1 in single-molecule folding trajectories
10.1038/s41467-017-01996-1 · 2017 · External reference
10.1021/cr400525m
10.1021/cr400525m · External reference
10.1093/nar/gkv1047
10.1093/nar/gkv1047 · External reference
PISCES: recent improvements to a PDB sequence culling server
10.1093/nar/gki402 · 2005 · External reference
