Research graph
References from MOSGA 2: Comparative genomics and validation tools. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/sdata.2018.154
10.1038/sdata.2018.154 · 2018 · External reference
10.1038/nbt.3893
10.1038/nbt.3893 · External reference
BRAKER2: automatic eukaryotic genome annotation with GeneMark-EP+ and AUGUSTUS supported by a protein database
2021 · External reference
10.1186/s13059-016-0924-1
10.1186/s13059-016-0924-1 · 2016 · External reference
10.1093/bioinformatics/btp348
10.1093/bioinformatics/btp348 · External reference
10.1093/nar/gkab688
10.1093/nar/gkab688 · External reference
10.1016/j.tree.2014.03.006
10.1016/j.tree.2014.03.006 · External reference
MUSCLE: multiple sequence alignment with high accuracy and high throughput
10.1093/nar/gkh340 · 2004 · External reference
Four high-quality draft genome assemblies of the marine heterotrophic nanoflagellate Cafeteria roenbergensis
10.1038/s41597-020-0363-4 · 2020 · External reference
10.1371/journal.pcbi.1008259
10.1371/journal.pcbi.1008259 · External reference
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries
10.1038/s41467-018-07641-9 · 2018 · External reference
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
10.1093/nar/gkf436 · 2002 · External reference
10.1093/molbev/mst010
10.1093/molbev/mst010 · External reference
10.1186/1471-2105-5-59
10.1186/1471-2105-5-59 · External reference
10.1093/nar/gky1037
10.1093/nar/gky1037 · External reference
10.1093/nar/gky1053
10.1093/nar/gky1053 · External reference
10.12688/f1000research.12232.1
10.12688/f1000research.12232.1 · External reference
10.1093/bioinformatics/btm404
10.1093/bioinformatics/btm404 · 2007 · External reference
FastME 2.0: a comprehensive, accurate, and fast distance-based phylogeny inference program
10.1093/molbev/msv150 · 2015 · External reference
10.1093/bioinformatics/bth315
10.1093/bioinformatics/bth315 · External reference
MOSGA: modular open-source genome annotator
10.1093/bioinformatics/btaa1003 · 2021 · External reference
PANTHER in 2013: modeling the evolution of gene function, and other gene attributes, in the context of phylogenetic trees
10.1093/nar/gks1118 · 2013 · External reference
10.1093/nar/gkv1189
10.1093/nar/gkv1189 · External reference
10.1016/j.cell.2019.11.017
10.1016/j.cell.2019.11.017 · External reference
10.1016/j.cub.2020.04.051
10.1016/j.cub.2020.04.051 · 2020 · External reference
10.1093/bioinformatics/bty633
10.1093/bioinformatics/bty633 · External reference
10.1038/s41586-018-0030-5
10.1038/s41586-018-0030-5 · External reference
NCBI-compliant genome submissions: tips and tricks to save time and money
2017 · External reference
10.1093/nar/gkz369
10.1093/nar/gkz369 · External reference
Estimating the quality of eukaryotic genomes recovered from metagenomic analysis with EukCC
10.1186/s13059-020-02155-4 · 2020 · External reference
10.1101/gr.131383.111
10.1101/gr.131383.111 · External reference
GenBank
10.1093/nar/gky989 · 2019 · External reference
NCBI taxonomy: a comprehensive update on curation, resources and tools
10.1093/database/baaa062 · 2020 · External reference
Hidden diversity of soil giant viruses
10.1038/s41467-018-07335-2 · 2018 · External reference
10.1093/bioinformatics/btv351
10.1093/bioinformatics/btv351 · External reference
10.1093/bioinformatics/btu033
10.1093/bioinformatics/btu033 · External reference
10.1093/nar/gki458
10.1093/nar/gki458 · External reference
10.1371/journal.pbio.3001007
10.1371/journal.pbio.3001007 · External reference
10.1038/nbt.3988
10.1038/nbt.3988 · External reference
Unresolved reference
External reference
10.1093/nar/gky1131
10.1093/nar/gky1131 · External reference
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
10.1093/nar/22.22.4673 · 1994 · External reference
10.1093/molbev/msx319
10.1093/molbev/msx319 · External reference
10.1534/g3.120.401059
10.1534/g3.120.401059 · External reference
10.1111/2041-210x.12628
10.1111/2041-210x.12628 · External reference
10.1016/j.chom.2019.03.007
10.1016/j.chom.2019.03.007 · External reference
