Research graph
References from Bacterial species identification using MALDI-TOF mass spectrometry and machine learning techniques: A large-scale benchmarking study. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1586/14789450.2015.1091731
10.1586/14789450.2015.1091731 · External reference
Prospective evaluation of a matrix-assisted laser desorption ionization–time of flight mass spectrometry system in a hospital clinical microbiology laboratory for identification of bacteria and yeasts: a bench-by-bench study for assessing the impact on time to identification and cost-effectiveness
10.1128/jcm.01405-12 · 2012 · External reference
10.1128/jcm.02215-09
10.1128/jcm.02215-09 · External reference
Rapid identification and antimicrobial susceptibility testing for urinary tract pathogens by direct analysis of urine samples using a maldi-tof ms-based combined protocol
10.3389/fmicb.2019.01182 · 2019 · External reference
Direct application of MALDI-TOF mass spectrometry to cerebrospinal fluid for rapid pathogen identification in a patient with bacterial meningitis
10.1016/j.cca.2014.04.024 · 2014 · External reference
Matrix-assisted laser desorption ionization-time of flight mass spectrometry for combined species identification and drug sensitivity testing in mycobacteria
10.1128/jcm.02089-16 · 2017 · External reference
Identification of beer-spoilage bacteria using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry
10.1016/j.ijfoodmicro.2014.05.003 · 2014 · External reference
10.1016/j.ijfoodmicro.2012.07.029
10.1016/j.ijfoodmicro.2012.07.029 · External reference
10.1007/s00253-021-11141-0
10.1007/s00253-021-11141-0 · External reference
Matrix-assisted laser desorption ionization-time of flight mass spectrometry: a fundamental shift in the routine practice of clinical microbiology
10.1128/cmr.00072-12 · 2013 · External reference
10.1086/600885
10.1086/600885 · External reference
10.1128/jcm.01463-10
10.1128/jcm.01463-10 · External reference
Highly efficient classification and identification of human pathogenic bacteria by maldi-tof ms
10.1074/mcp.m700339-mcp200 · 2008 · External reference
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10.1111/j.1574-6976.2011.00298.x
10.1111/j.1574-6976.2011.00298.x · External reference
Machine learning for microbial identification and antimicrobial susceptibility testing on maldi-tof mass spectra: a systematic review
10.1016/j.cmi.2020.03.014 · 2020 · External reference
Comparison of the bruker biotyper and vitek ms matrix-assisted laser desorption ionization-time of flight mass spectrometry systems for identification of mycobacteria using simplified protein extraction protocols
10.1128/jcm.01996-13 · 2013 · External reference
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10.1099/ijs.0.016949-0
10.1099/ijs.0.016949-0 · External reference
10.1128/msystems.00437-19
10.1128/msystems.00437-19 · External reference
Fast pathogen identification using single-cell matrix-assisted laser desorption/ionization-aerosol time-of-flight mass spectrometry data and deep learning methods
10.1021/acs.analchem.9b05806 · 2020 · External reference
10.1039/c4ay00068d
10.1039/c4ay00068d · External reference
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2004 · External reference
10.1093/bioinformatics/btn398
10.1093/bioinformatics/btn398 · External reference
Comparison of public peak detection algorithms for maldi mass spectrometry data analysis
2009 · External reference
10.1093/database/baaa062
10.1093/database/baaa062 · External reference
10.1093/nar/gkz956
10.1093/nar/gkz956 · External reference
10.1007/s10618-010-0175-9
10.1007/s10618-010-0175-9 · External reference
Applied regression analysis, linear models, and related methods
1997 · External reference
10.1145/1015330.1015363
10.1145/1015330.1015363 · External reference
On the effectiveness of heuristics for learning nested dichotomies: an empirical analysis
10.1007/s10994-018-5733-1 · 2018 · External reference
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10.1007/978-3-319-46227-1_32
10.1007/978-3-319-46227-1_32 · External reference
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10.1145/3394486.3406704
10.1145/3394486.3406704 · External reference
10.1007/978-3-030-42553-1_3
10.1007/978-3-030-42553-1_3 · External reference
Aleatoric and epistemic uncertainty in machine learning: an introduction to concepts and methods
10.1007/s10994-021-05946-3 · 2021 · External reference
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Random search for hyper-parameter optimization
2012 · External reference
Scikit-learn: machine learning in Python
2011 · External reference
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Rapid classification of group b streptococcus serotypes based on matrix-assisted laser desorption ionization-time of flight mass spectrometry and machine learning techniques
2019 · External reference
10.1371/journal.pone.0222636
10.1371/journal.pone.0222636 · External reference
Discrimination of contagious and environmental strains of streptococcus uberis in dairy herds by means of mass spectrometry and machine-learning
10.1038/s41598-018-35867-6 · 2018 · External reference
Identification of klebsiella pneumoniae, klebsiella quasipneumoniae, klebsiella variicola and related phylogroups by maldi-tof mass spectrometry
10.3389/fmicb.2018.03000 · 2018 · External reference
10.1371/journal.pone.0218951
10.1371/journal.pone.0218951 · External reference
10.1093/bioinformatics/bts447
10.1093/bioinformatics/bts447 · External reference
10.1093/bioinformatics/btaa429
10.1093/bioinformatics/btaa429 · External reference
Bacterial species identification from maldi-tof mass spectra through data analysis and machine learning
10.1016/j.syapm.2010.11.003 · 2011 · External reference
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Classification algorithm for subspecies identification within the mycobacterium abscessus species, based on matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.00788-14 · 2014 · External reference
Rapid staphylococcus aureus discrimination between methicillin-sensitive and methicillin-resistant using maldi-tof mass spectrometry
10.4265/bio.22.163 · 2017 · External reference
10.1016/j.talanta.2003.11.034
10.1016/j.talanta.2003.11.034 · External reference
Identification of bacillus anthracis by using matrix-assisted laser desorption ionization-time of flight mass spectrometry and artificial neural networks
10.1128/aem.00857-09 · 2009 · External reference
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A study of hierarchical and flat classification of proteins
10.1109/tcbb.2008.104 · 2010 · External reference
Improving protein function prediction using the hierarchical structure of the gene ontology
2005 · External reference
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Hierarchical classification of gene ontology terms using the gostruct method
10.1142/s0219720010004744 · 2010 · External reference
Hierarchical learning of tree classifiers for large-scale plant species identification
10.1109/tip.2015.2457337 · 2015 · External reference
10.1109/smc.2013.326
10.1109/smc.2013.326 · External reference
Development of a hierarchical classification system with artificial neural networks and ft-ir spectra for the identification of bacteria
10.1366/0003702001948619 · 2000 · External reference
Hierarchical classification of microorganisms based on high-dimensional phenotypic data
2017 · External reference
10.1186/1471-2105-11-69
10.1186/1471-2105-11-69 · External reference
Naive bayesian classifier for rapid assignment of rrna sequences into the new bacterial taxonomy
2007 · External reference
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10.1007/s10618-021-00751-x
10.1007/s10618-021-00751-x · External reference
Classification algorithm for subspecies identification within the mycobacterium abscessus species, based on matrix-assisted laser desorption ionization-time of flight mass spectrometry
10.1128/jcm.00788-14 · 2014 · External reference
Rapid classification of group b streptococcus serotypes based on matrix-assisted laser desorption ionization-time of flight mass spectrometry and machine learning techniques
2019 · External reference
The technical and biological reproducibility of matrix-assisted laser desorption ionization-time of flight mass spectrometry (maldi-tof ms) based typing: employment of bioinformatics in a multicenter study
10.1371/journal.pone.0164260 · 2016 · External reference
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2020 · External reference
10.1371/journal.pone.0238302
10.1371/journal.pone.0238302 · External reference
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Points of significance: importance of being uncertain
10.1038/nmeth.2613 · 2013 · External reference
Probabilistic machine learning and artificial intelligence
2015 · External reference
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10.1109/iccvw.2019.00098
10.1109/iccvw.2019.00098 · External reference
10.1109/cvpr.2016.173
10.1109/cvpr.2016.173 · External reference
Rapid detection of vancomycin-intermediate staphylococcus aureus by matrix-assisted laser desorption ionization–time of flight mass spectrometry
10.1128/jcm.02428-15 · 2016 · External reference
