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References from A stepwise docking molecular dynamics approach for simulating antibody recognition with substantial conformational changes. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1146/annurev.physiol.62.1.755
10.1146/annurev.physiol.62.1.755 · External reference
10.1073/pnas.0507603102
10.1073/pnas.0507603102 · External reference
10.1021/jp4010967
10.1021/jp4010967 · External reference
Unresolved reference
External reference
Unresolved reference
2013 · External reference
10.1016/b978-012124546-7/50366-1
10.1016/b978-012124546-7/50366-1 · External reference
Antibody-protein binding and conformational changes: identifying allosteric signalling pathways to engineer a better effector response
10.1038/s41598-020-70680-0 · 2020 · External reference
10.1080/07391102.1985.10508447
10.1080/07391102.1985.10508447 · External reference
10.1016/j.str.2009.09.001
10.1016/j.str.2009.09.001 · External reference
10.1016/j.jmgm.2018.06.009
10.1016/j.jmgm.2018.06.009 · External reference
Current tools and methods in molecular dynamics (MD) simulations for drug design
10.2174/0929867323666160530144742 · 2016 · External reference
Inherent dynamics of the acid-sensing ion channel 1 correlates with the gating mechanism
10.1371/journal.pbio.1000151 · 2009 · External reference
Structural basis for the broad, antibody-mediated neutralization of H5N1 influenza virus
2018 · External reference
10.1038/nchem.2785
10.1038/nchem.2785 · External reference
Enhanced sampling applied to modeling allosteric regulation in transcription
10.1021/acs.jpclett.9b02226 · 2019 · External reference
Nonphysical sampling distributions in Monte Carlo free-energy estimation
1977 · External reference
10.1073/pnas.1502762112
10.1073/pnas.1502762112 · External reference
10.1093/bioinformatics/btu097
10.1093/bioinformatics/btu097 · External reference
10.1093/nar/gki481
10.1093/nar/gki481 · External reference
10.1093/nar/gkl206
10.1093/nar/gkl206 · External reference
10.1038/s41596-020-0312-x
10.1038/s41596-020-0312-x · External reference
10.1093/bioinformatics/btt038
10.1093/bioinformatics/btt038 · External reference
FiberDock: a web server for flexible induced-fit backbone refinement in molecular docking
10.1093/nar/gkq373 · 2010 · External reference
FireDock: Fast interaction refinement in molecular docking
10.1002/prot.21495 · 2007 · External reference
10.1016/j.jmb.2015.09.014
10.1016/j.jmb.2015.09.014 · External reference
10.1021/ja0260162
10.1021/ja0260162 · External reference
10.1021/ci4006047
10.1021/ci4006047 · External reference
10.1016/0263-7855(94)80072-3
10.1016/0263-7855(94)80072-3 · External reference
Binding direction-based two-dimensional flattened contact area computing algorithm for protein-protein interactions
10.3390/molecules22101722 · 2017 · External reference
An analysis of conformational changes on protein-protein association: implications for predictive docking
10.1093/protein/12.4.271 · 1999 · External reference
10.1016/0263-7855(96)00018-5
10.1016/0263-7855(96)00018-5 · External reference
10.1063/1.445869
10.1063/1.445869 · External reference
10.1002/jcc.20289
10.1002/jcc.20289 · External reference
10.1103/physreva.33.3628
10.1103/physreva.33.3628 · External reference
10.1103/physreva.31.1695
10.1103/physreva.31.1695 · External reference
10.1063/1.470117
10.1063/1.470117 · External reference
10.1016/0021-9991(77)90098-5
10.1016/0021-9991(77)90098-5 · External reference
PyMOL: A communications tool for computational models
2005 · External reference