Research graph
References from Computational analysis and prediction of PE_PGRS proteins using machine learning. Local targets link to admitted publications; unresolved targets remain external evidence.
Unresolved reference
External reference
The success and failure of BCG - implications for a novel tuberculosis vaccine
10.1038/nrmicro1211 · 2005 · External reference
10.1038/31159
10.1038/31159 · External reference
10.1007/bf00381781
10.1007/bf00381781 · External reference
The PE and PPE protein families of Mycobacterium tuberculosis
10.1002/9783527611614.ch7 · 2008 · External reference
Evidence that mycobacterial PE_PGRS proteins are cell surface constituents that influence interactions with other cells
10.1128/iai.69.12.7326-7333.2001 · 2001 · External reference
10.1046/j.1365-2958.2002.02813.x
10.1046/j.1365-2958.2002.02813.x · External reference
10.1111/j.1365-2958.2004.04007.x
10.1111/j.1365-2958.2004.04007.x · External reference
10.1016/j.tube.2011.04.004
10.1016/j.tube.2011.04.004 · External reference
10.1016/j.micpath.2010.07.004
10.1016/j.micpath.2010.07.004 · External reference
10.1080/21505594.2020.1785815
10.1080/21505594.2020.1785815 · External reference
Interrelation of Ca(2+) and PE_PGRS proteins during Mycobacterium tuberculosis pathogenesis
10.1007/s12038-018-9828-4 · 2019 · External reference
10.1038/nrg3664
10.1038/nrg3664 · External reference
Identification of immunogenic Salmonella enterica serotype Typhi antigens expressed in chronic biliary carriers of S. Typhi in Kathmandu, Nepal
10.1371/journal.pntd.0002335 · 2013 · External reference
10.1093/nar/gkl164
10.1093/nar/gkl164 · External reference
10.1093/nar/gky448
10.1093/nar/gky448 · External reference
HITS-PR-HHblits: protein remote homology detection by combining PageRank and Hyperlink-Induced Topic Search
2018 · External reference
HH-suite3 for fast remote homology detection and deep protein annotation
10.1186/s12859-019-3019-7 · 2019 · External reference
Protein remote homology detection based on bidirectional long short-term memory
10.1186/s12859-017-1842-2 · 2017 · External reference
ProtDet-CCH: protein remote homology detection by combining long short-term memory and ranking methods
10.1109/tcbb.2018.2789880 · 2019 · External reference
10.1093/bib/bbaa356
10.1093/bib/bbaa356 · External reference
10.1093/bib/bbaa255
10.1093/bib/bbaa255 · External reference
10.1093/bib/bbab244
10.1093/bib/bbab244 · External reference
10.1093/bib/bbaa278
10.1093/bib/bbaa278 · External reference
10.1016/j.ymthe.2021.04.004
10.1016/j.ymthe.2021.04.004 · External reference
10.1093/bib/bbz177
10.1093/bib/bbz177 · External reference
10.1093/bioinformatics/btaa143
10.1093/bioinformatics/btaa143 · External reference
10.1093/bioinformatics/btaa155
10.1093/bioinformatics/btaa155 · External reference
10.1093/bioinformatics/btab560
10.1093/bioinformatics/btab560 · External reference
10.1093/bib/bbaa313
10.1093/bib/bbaa313 · External reference
10.1093/bib/bbaa275
10.1093/bib/bbaa275 · External reference
Attention-based multi-label neural networks for integrated prediction and interpretation of twelve widely occurring RNA modifications
10.1038/s41467-021-24313-3 · 2021 · External reference
10.1007/978-1-59745-535-0_4
10.1007/978-1-59745-535-0_4 · 2007 · External reference
10.1093/nar/gkv1189
10.1093/nar/gkv1189 · External reference
10.1093/bioinformatics/bts565
10.1093/bioinformatics/bts565 · External reference
10.1093/bioinformatics/btz721
10.1093/bioinformatics/btz721 · External reference
10.1016/j.gpb.2019.08.002
10.1016/j.gpb.2019.08.002 · External reference
10.1093/bioinformatics/btu852
10.1093/bioinformatics/btu852 · External reference
10.1093/bioinformatics/bty522
10.1093/bioinformatics/bty522 · External reference
Positive-unlabelled learning of glycosylation sites in the human proteome
2019 · External reference
10.1093/bib/bbaa171
10.1093/bib/bbaa171 · External reference
BioSeq-Analysis: a platform for DNA, RNA and protein sequence analysis based on machine learning approaches
10.1093/bib/bbx165 · 2019 · External reference
10.1093/bioinformatics/bty140
10.1093/bioinformatics/bty140 · External reference
10.1093/bib/bbz041
10.1093/bib/bbz041 · External reference
10.1093/nar/gkab122
10.1093/nar/gkab122 · External reference
10.1093/bioinformatics/btr291
10.1093/bioinformatics/btr291 · External reference
Prediction of protein folding class using global description of amino acid sequence
10.1073/pnas.92.19.8700 · 1995 · External reference
Unresolved reference
2011 · External reference
10.1073/pnas.0607879104
10.1073/pnas.0607879104 · External reference
Unresolved reference
External reference
Xgboost: extreme gradient boosting
2015 · External reference
Lightgbm: A highly efficient gradient boosting decision tree
2017 · External reference
Greedy function approximation: a gradient boosting machine
2001 · External reference
Unresolved reference
External reference
10.1093/bioinformatics/btz016
10.1093/bioinformatics/btz016 · External reference
10.1093/bib/bbaa049
10.1093/bib/bbaa049 · External reference
GlycoMine(struct): a new bioinformatics tool for highly accurate mapping of the human N-linked and O-linked glycoproteomes by incorporating structural features
10.1038/srep34595 · 2016 · External reference
10.1093/bib/bbab245
10.1093/bib/bbab245 · External reference
Unresolved reference
External reference
10.1093/bib/bbaa124
10.1093/bib/bbaa124 · External reference
The PE-PGRS glycine-rich proteins of Mycobacterium tuberculosis: a new family of fibronectin-binding proteins?
10.1099/00221287-145-12-3487 · 1999 · External reference
10.1007/s12038-018-9775-0
10.1007/s12038-018-9775-0 · External reference
PE_PGRS: Vital proteins in promoting mycobacterial survival and modulating host immunity and metabolism
2021 · External reference
A new sequence logo plot to highlight enrichment and depletion
10.1186/s12859-018-2489-3 · 2018 · External reference
10.1111/j.1365-2958.2009.06784.x
10.1111/j.1365-2958.2009.06784.x · External reference
10.2307/2346830
10.2307/2346830 · External reference
Feature selection based on mutual information: criteria of max-dependency, max-relevance, and min-redundancy
10.1109/tpami.2005.159 · 2005 · External reference
Unresolved reference
2017 · External reference
Positive-unlabeled learning in bioinformatics and computational biology: a brief review
2021 · External reference
