Research graph
References from MPEPE, a predictive approach to improve protein expression in E. coli based on deep learning. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1016/j.sbi.2017.11.007
10.1016/j.sbi.2017.11.007 · External reference
Expression and purification of a recombinant enterotoxin protein using different E. coli host strains and expression vectors
10.1007/s10930-021-09973-w · 2021 · External reference
Challenges associated with the formation of recombinant protein inclusion bodies in Escherichia coli and strategies to address them for industrial applications
10.3389/fbioe.2021.630551 · 2021 · External reference
Soluble expression of recombinant midgut zymogen (native propeptide) proteases from the Aedes aegypti Mosquito utilizing E-coli as a host
10.1186/s12858-018-0101-0 · 2018 · External reference
Functional characterization of Helianthus annuus phytochelatin synthase (HaPCS): Gene expression and protein profiles of HaPCS responding to arsenic and evaluation of arsenic accumulation in engineered bacteria expressing HaPCS
10.1016/j.envexpbot.2021.104470 · 2021 · External reference
10.1126/science.1170160
10.1126/science.1170160 · External reference
10.1038/nprot.2007.400
10.1038/nprot.2007.400 · External reference
Glu659Leu substitution of recombinant HIV fusion inhibitor C52L induces soluble expression in Escherichia coli with equivalent anti-HIV potency
10.1093/protein/gzr013 · 2011 · External reference
10.1038/s41589-018-0121-5
10.1038/s41589-018-0121-5 · External reference
10.1021/acs.molpharmaceut.8b00341
10.1021/acs.molpharmaceut.8b00341 · External reference
Adversarial self-supervised clustering with cluster-specificity distribution
2021 · External reference
Predicting the solubility of recombinant proteins in Escherichia coli
1991 · External reference
10.1002/bit.22537
10.1002/bit.22537 · External reference
EPSOL: sequence-based protein solubility prediction using multidimensional embedding
2021 · External reference
Codon optimization with deep learning to enhance protein expression
10.1038/s41598-020-74091-z · 2020 · External reference
10.1038/s41594-018-0080-2
10.1038/s41594-018-0080-2 · External reference
10.1038/nature16509
10.1038/nature16509 · External reference
Large-scale experimental studies show unexpected amino acid effects on protein expression and solubility in vivo in E. coli
10.1186/2042-5783-1-6 · 2011 · External reference
10.1002/pmic.201400441
10.1002/pmic.201400441 · External reference
10.1016/j.cels.2016.01.009
10.1016/j.cels.2016.01.009 · External reference
10.1016/j.ijbiomac.2021.03.058
10.1016/j.ijbiomac.2021.03.058 · External reference
Predicting the phenotypic effects of non-synonymous single nucleotide polymorphisms based on support vector machines
10.1186/1471-2105-8-450 · 2007 · External reference
10.1038/s41586-021-03819-2
10.1038/s41586-021-03819-2 · External reference
10.1093/nar/26.7.1848
10.1093/nar/26.7.1848 · External reference
Unresolved reference
2001 · External reference
Enhancement of catalysis and functional expression of a bacterial laccase by single amino acid replacement
10.1016/j.ijbiomac.2013.05.011 · 2013 · External reference
Characterization of an alkali- and halide-resistant laccase expressed in E. coli: CotA from Bacillus clausii
10.1371/journal.pone.0099402 · 2014 · External reference
Copper incorporation into recombinant CotA laccase from Bacillus subtilis: characterization of fully copper loaded enzymes
2008 · External reference
Identification of bacterial laccase cueO mutation from the metagenome of chemical plant sludge
10.1186/s40643-017-0178-0 · 2017 · External reference
Expression, characterization and mutagenesis of an FAD-dependent glucose dehydrogenase from Aspergillus terreus
10.1016/j.enzmictec.2014.10.002 · 2015 · External reference
10.1371/journal.pgen.1004392
10.1371/journal.pgen.1004392 · External reference
Protein charge distribution in proteomes and its impact on translation
10.1371/journal.pcbi.1005549 · 2017 · External reference
Codon usage of highly expressed genes affects proteome-wide translation efficiency
10.1073/pnas.1719375115 · 2018 · External reference
10.1074/jbc.ra118.001805
10.1074/jbc.ra118.001805 · External reference
Biodegradation of bisphenol A by the immobilized laccase on some synthesized and modified forms of zeolite Y
10.1016/j.jhazmat.2019.121950 · 2020 · External reference
Stabilization of fungi-derived recombinant FAD-dependent glucose dehydrogenase by introducing a disulfide bond
10.1007/s10529-015-1774-8 · 2015 · External reference
Composite effects of gene determinants on the translation speed and density of ribosomes
10.1186/gb-2011-12-11-r110 · 2011 · External reference
10.1002/bip.20093
10.1002/bip.20093 · External reference
10.1371/journal.pgen.1007166
10.1371/journal.pgen.1007166 · External reference
10.1016/j.molcel.2016.06.012
10.1016/j.molcel.2016.06.012 · External reference
10.1016/j.cell.2010.03.031
10.1016/j.cell.2010.03.031 · External reference
10.1093/bioinformatics/btw647
10.1093/bioinformatics/btw647 · External reference
10.1073/pnas.0909910107
10.1073/pnas.0909910107 · External reference
10.1534/genetics.110.115477
10.1534/genetics.110.115477 · External reference
10.1093/nar/gkh834
10.1093/nar/gkh834 · External reference
10.1016/j.cell.2010.03.033
10.1016/j.cell.2010.03.033 · External reference
10.1093/nar/gku1313
10.1093/nar/gku1313 · External reference
PROSO II–a new method for protein solubility prediction
10.1111/j.1742-4658.2012.08603.x · 2012 · External reference
