Research graph
References from Msuite2: All-in-one DNA methylation data analysis toolkit with enhanced usability and performance. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nrg3354
10.1038/nrg3354 · External reference
10.1038/npp.2012.112
10.1038/npp.2012.112 · External reference
DNA methylation in mammals
10.1101/cshperspect.a019133 · 2014 · External reference
DNA methylation and the preservation of cell identity
10.1016/j.gde.2017.06.007 · 2017 · External reference
10.1073/pnas.1508736112
10.1073/pnas.1508736112 · External reference
10.1073/pnas.1313995110
10.1073/pnas.1313995110 · External reference
Subtype-GAN: a deep learning approach for integrative cancer subtyping of multi-omics data
10.1093/bioinformatics/btab109 · 2021 · External reference
10.3390/genes10010032
10.3390/genes10010032 · External reference
10.3748/wjg.v27.i34.5666
10.3748/wjg.v27.i34.5666 · External reference
10.1038/nrg.2017.80
10.1038/nrg.2017.80 · External reference
10.1016/j.cell.2008.03.029
10.1016/j.cell.2008.03.029 · External reference
10.1038/nature06745
10.1038/nature06745 · External reference
Comprehensive benchmarking of software for mapping whole genome bisulfite data: from read alignment to DNA methylation analysis
2021 · External reference
10.1038/s41587-019-0041-2
10.1038/s41587-019-0041-2 · External reference
Msuite: A High-Performance and Versatile DNA Methylation Data-Analysis Toolkit
10.1016/j.patter.2020.100127 · 2020 · External reference
10.1016/j.ygeno.2021.03.004
10.1016/j.ygeno.2021.03.004 · External reference
BS-Seeker3: ultrafast pipeline for bisulfite sequencing
10.1186/s12859-018-2120-7 · 2018 · External reference
10.1093/bioinformatics/btr167
10.1093/bioinformatics/btr167 · External reference
Fast and accurate alignment of long bisulfite-seq reads
2014 · External reference
Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data
10.1093/bioinformatics/btaa171 · 2020 · External reference
A novel NGS library preparation method to characterize native termini of fragmented DNA
10.1093/nar/gkaa128 · 2020 · External reference
Evaluation of whole-genome DNA methylation sequencing library preparation protocols
10.1186/s13072-021-00401-y · 2021 · External reference
Fast gapped-read alignment with Bowtie 2
10.1038/nmeth.1923 · 2012 · External reference
10.1038/nmeth.3317
10.1038/nmeth.3317 · External reference
10.1186/1471-2105-10-232
10.1186/1471-2105-10-232 · External reference
10.1038/nmeth.2221
10.1038/nmeth.2221 · External reference
10.1038/nature11247
10.1038/nature11247 · External reference
10.1073/pnas.1804134115
10.1073/pnas.1804134115 · External reference
10.1101/gr.254904.119
10.1101/gr.254904.119 · External reference
