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References from Modeling the effect of rRNA-mRNA interactions and mRNA folding on mRNA translation in chloroplasts. Local targets link to admitted publications; unresolved targets remain external evidence.
Unresolved reference
External reference
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Chloroplast translation initiation factors regulate leaf variegation and development
2016 · External reference
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Function of the Chlamydomonas reinhardtii petd 5’ untranslated region in regulating the accumulation of subunit IV of the cytochrome b6/f complex
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Shine-Dalgarno-like sequences are not required for translation of chloroplast mRNAs in Chlamydomonas reinhardtii chloroplasts or in Escherichia coli
10.1007/s004380050648 · 1998 · External reference
Analysis of the translational initiation region on the Euglena gracilis chloroplast ribulose-bisphosphate carboxylase/oxygenase (rbcL) messenger RNA
10.1016/s0021-9258(17)37313-1 · 1994 · External reference
Translation of the psbA mRNA of Chlamydomonas reinhardtii requires a structured RNA element contained within the 5’ untranslated region
10.1083/jcb.127.6.1537 · 1994 · External reference
Identification of cis-acting RNA leader elements required for chloroplast psbD gene expression in Chlamydomonas
10.1105/tpc.11.5.957 · 1999 · External reference
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10.1016/s0021-9258(18)47216-x · External reference
Translation of tobacco chloroplast rps14 mRNA depends on a Shine-Dalgarno-like sequence in the 5’-untranslated region but not on internal RNA editing in the coding region
10.1016/s0014-5793(98)00673-5 · 1998 · External reference
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The plastid ribosomal proteins. Identification of all the proteins in the 50 S subunit of an organelle ribosome (chloroplast)
2000 · External reference
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10.1007/978-1-4020-3166-3 · 2004 · External reference
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2013 · External reference
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10.1073/pnas.1012076108 · External reference
10.1016/j.csbj.2021.04.042 · Admitted local publication
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10.1186/s13059-020-01971-y · External reference
Chlamydomonas reinhardtii as the photosynthetic yeast
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10.1093/nar/15.3.1281 · External reference
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10.1126/science.1241934 · External reference
Mapping the transcriptome-wide landscape of RBP binding sites using gPAR-CLIP-seq: experimental procedures
10.1007/978-1-4939-3079-1_5 · 2016 · External reference
CLIP and complementary methods
10.1038/s43586-021-00018-1 · 2021 · External reference
10.1073/pnas.1815238116
10.1073/pnas.1815238116 · External reference
The global phosphoproteome of Chlamydomonas reinhardtii reveals complex organellar phosphorylation in the flagella and thylakoid membrane
10.1074/mcp.m114.038281 · 2014 · External reference
Modelling the efficiency of codon-tRNA interactions based on codon usage bias
10.1093/dnares/dsu017 · 2014 · External reference
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10.1007/bf02712675 · 1983 · External reference
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10.1007/bf02671562 · 1994 · External reference
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10.1007/bf02668635 · 1989 · External reference
Unresolved reference
External reference
10.1101/gr.1224503
10.1101/gr.1224503 · External reference
ViennaRNA Package 2.0
10.1186/1748-7188-6-26 · 2011 · External reference
Clustal omega
10.1002/0471250953.bi0313s48 · 2014 · External reference
RNA consensus structure prediction with RNAalifold
10.1007/978-1-59745-514-5_33 · 2007 · External reference
RNAalifold: improved consensus structure prediction for RNA alignments
10.1186/1471-2105-9-474 · 2008 · External reference