Research graph
References from SnapHiC2: A computationally efficient loop caller for single cell Hi-C data. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nature12593
10.1038/nature12593 · External reference
10.1038/nature23001
10.1038/nature23001 · External reference
10.1038/nature21711
10.1038/nature21711 · External reference
10.1038/nature21429
10.1038/nature21429 · External reference
10.1038/s41592-019-0547-z
10.1038/s41592-019-0547-z · External reference
10.1038/s41586-020-03182-8
10.1038/s41586-020-03182-8 · External reference
10.1073/pnas.1901423116
10.1073/pnas.1901423116 · External reference
Multiscale and integrative single-cell Hi-C analysis with Higashi
2021 · External reference
10.1038/s41592-021-01231-2
10.1038/s41592-021-01231-2 · External reference
10.1016/j.cell.2014.11.021
10.1016/j.cell.2014.11.021 · External reference
10.1038/s41586-020-2151-x
10.1038/s41586-020-2151-x · External reference
Comparison of computational methods for 3D genome analysis at single-cell Hi-C level
2019 · External reference
10.1038/nmeth.4155
10.1038/nmeth.4155 · External reference
10.1016/j.cell.2020.12.032
10.1016/j.cell.2020.12.032 · External reference
Three-dimensional genome structures of single diploid human cells
10.1126/science.aat5641 · 2018 · External reference
10.1038/s41594-019-0205-2
10.1038/s41594-019-0205-2 · External reference
10.1038/s41592-019-0502-z
10.1038/s41592-019-0502-z · External reference
10.1038/s41586-020-2125-z
10.1038/s41586-020-2125-z · External reference
10.1371/journal.pcbi.1008173
10.1371/journal.pcbi.1008173 · External reference
Unresolved reference
2011 · External reference
Mapping chromatin loops in single cells
2022 · External reference
10.1146/annurev-biodatasci-020121-084709
10.1146/annurev-biodatasci-020121-084709 · External reference
Single-cell Hi-C data analysis: safety in numbers
10.1093/bib/bbab316 · 2021 · External reference
A general and robust deep learning framework for accurate chromatin loop detection in genome-wide contact maps
2022 · External reference
Brain cell type-specific enhancer-promoter interactome maps and disease-risk association
10.1126/science.aay0793 · 2019 · External reference
10.1016/j.cell.2017.09.043
10.1016/j.cell.2017.09.043 · External reference
MAPS: model-based analysis of long-range chromatin interactions from PLAC-seq and HiChIP experiments
10.1371/journal.pcbi.1006982 · 2019 · External reference
10.1038/nmeth.3999
10.1038/nmeth.3999 · External reference
10.1038/ng.3963
10.1038/ng.3963 · External reference
10.1371/journal.pone.0114485
10.1371/journal.pone.0114485 · External reference
Prenatal expression patterns of genes associated with neuropsychiatric disorders
10.1176/appi.ajp.2014.13111452 · 2014 · External reference
10.1016/j.neuron.2015.11.013
10.1016/j.neuron.2015.11.013 · External reference
