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References from Computational identification of protein complexes from network interactions: Present state, challenges, and the way forward. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1093/bioinformatics/btl039
10.1093/bioinformatics/btl039 · External reference
10.1002/9780470570418.ch19
10.1002/9780470570418.ch19 · 2010 · External reference
10.1016/j.dam.2019.02.048
10.1016/j.dam.2019.02.048 · External reference
10.1016/j.tcs.2021.10.002
10.1016/j.tcs.2021.10.002 · External reference
10.1038/nbt.4024
10.1038/nbt.4024 · External reference
10.1038/nbt1002-991
10.1038/nbt1002-991 · External reference
An automated method for finding molecular complexes in large protein interaction networks
10.1186/1471-2105-4-2 · 2003 · External reference
10.1093/nar/gkt1079
10.1093/nar/gkt1079 · External reference
10.1088/1742-5468/2008/10/p10008
10.1088/1742-5468/2008/10/p10008 · External reference
10.1093/bioinformatics/17.5.455
10.1093/bioinformatics/17.5.455 · External reference
10.1093/bioinformatics/bth456
10.1093/bioinformatics/bth456 · External reference
Evaluation of clustering algorithms for protein-protein interaction networks
2006 · External reference
10.3390/molecules23061460
10.3390/molecules23061460 · External reference
10.15252/msb.20177532
10.15252/msb.20177532 · External reference
10.1093/bib/bbt039
10.1093/bib/bbt039 · External reference
Semantic integration to identify overlapping functional modules in protein interaction networks
2007 · External reference
10.1074/mcp.m600381-mcp200
10.1074/mcp.m600381-mcp200 · External reference
Toward a Comprehensive Atlas of the Physical Interactome ofSaccharomyces cerevisiae
10.1074/mcp.m600381-mcp200 · 2007 · External reference
10.1126/science.aaw6718
10.1126/science.aaw6718 · External reference
10.1038/35081138
10.1038/35081138 · External reference
Algorithm 235: Random permutation
10.1145/364520.364540 · 1964 · External reference
10.1093/nar/30.7.1575
10.1093/nar/30.7.1575 · External reference
10.1126/science.1136800
10.1126/science.1136800 · External reference
10.1038/nature04532
10.1038/nature04532 · External reference
10.1240/sav_gbm_2002_h_000243
10.1240/sav_gbm_2002_h_000243 · External reference
Unresolved reference
External reference
10.1093/nar/gky973
10.1093/nar/gky973 · External reference
Unresolved reference
2016 · External reference
Unresolved reference
2009 · External reference
Detecting protein complexes in protein interaction networks using a ranking algorithm with a refined merging procedure
2014 · External reference
10.1093/nar/gkm909
10.1093/nar/gkm909 · External reference
Unresolved reference
2017 · External reference
10.1016/j.cell.2015.06.043
10.1016/j.cell.2015.06.043 · External reference
10.1073/pnas.97.3.1143
10.1073/pnas.97.3.1143 · External reference
Unresolved reference
1997 · External reference
Unresolved reference
2008 · External reference
10.1093/nar/gkw1003
10.1093/nar/gkw1003 · External reference
10.1186/1471-2105-11-521
10.1186/1471-2105-11-521 · External reference
10.1093/bioinformatics/bth351
10.1093/bioinformatics/bth351 · External reference
10.1093/nar/gkv1049
10.1093/nar/gkv1049 · External reference
Network-based prediction of protein interactions
2019 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Unresolved reference
2008 · External reference
10.1093/bioinformatics/btp311
10.1093/bioinformatics/btp311 · External reference
10.1142/9781860948732_0019
10.1142/9781860948732_0019 · External reference
Computational approaches for detecting protein complexes from protein interaction networks: a survey
10.1186/1471-2164-11-s1-s3 · 2010 · External reference
Discovering overlapped protein complexes from weighted PPI networks by removing inter-module hubs
2017 · External reference
CDAP: An Online Package for Evaluation of Complex Detection Methods
2019 · External reference
10.3389/fgene.2020.00654
10.3389/fgene.2020.00654 · External reference
10.1186/1471-2105-8-408
10.1186/1471-2105-8-408 · External reference
10.1093/nar/gkn870
10.1093/nar/gkn870 · External reference
Unresolved reference
External reference
10.1093/nar/gkh092
10.1093/nar/gkh092 · External reference
10.1038/nmeth.1938
10.1038/nmeth.1938 · External reference
10.1093/emboj/cdg359
10.1093/emboj/cdg359 · External reference
10.1016/j.csbj.2021.09.014
10.1016/j.csbj.2021.09.014 · External reference
10.1093/bioinformatics/btaa1089
10.1093/bioinformatics/btaa1089 · External reference
10.1007/978-3-030-93413-2_50
10.1007/978-3-030-93413-2_50 · 2022 · External reference
On cluster validity for the fuzzy c-means model
10.1109/91.413225 · 1995 · External reference
10.1073/pnas.0502674102
10.1073/pnas.0502674102 · External reference
10.1016/j.compbiolchem.2020.107399
10.1016/j.compbiolchem.2020.107399 · External reference
10.1186/s12859-016-1191-6
10.1186/s12859-016-1191-6 · External reference
10.1145/2623330.2623732
10.1145/2623330.2623732 · External reference
Structure of Hæmoglobin: A Three-Dimensional Fourier Synthesis at 5.5-Å. Resolution
1960 · External reference
10.1093/nar/gkn1005
10.1093/nar/gkn1005 · External reference
10.1155/2014/147648
10.1155/2014/147648 · External reference
10.1186/jbiol36
10.1186/jbiol36 · 2006 · External reference
10.1613/jair.514
10.1613/jair.514 · External reference
10.1038/13732
10.1038/13732 · External reference
A new measure for functional similarity of gene products based on Gene Ontology
2006 · External reference
Probabilistic prediction and ranking of human protein-protein interactions
2007 · External reference
10.1016/j.ymeth.2016.06.010
10.1016/j.ymeth.2016.06.010 · External reference
10.15252/msb.20156351
10.15252/msb.20156351 · External reference
10.1073/pnas.2032324100
10.1073/pnas.2032324100 · External reference
10.1145/3064650
10.1145/3064650 · External reference
10.1142/s021972001230002x
10.1142/s021972001230002x · External reference
10.1093/nar/gkj109
10.1093/nar/gkj109 · External reference
10.1093/nar/gku1003
10.1093/nar/gku1003 · External reference
10.1016/j.cell.2014.05.039
10.1016/j.cell.2014.05.039 · External reference
10.1145/2736277.2741093
10.1145/2736277.2741093 · External reference
10.1126/science.1153878
10.1126/science.1153878 · External reference
10.1371/journal.pone.0079217
10.1371/journal.pone.0079217 · External reference
Unresolved reference
External reference
10.1038/nature750
10.1038/nature750 · External reference
10.1093/bioinformatics/btm087
10.1093/bioinformatics/btm087 · External reference
Predicting overlapping protein complexes based on core-attachment and a local modularity structure
2018 · External reference
10.1093/bib/bbz085
10.1093/bib/bbz085 · External reference
10.1093/bib/bbaa016
10.1093/bib/bbaa016 · External reference
10.1093/nar/30.1.303
10.1093/nar/30.1.303 · External reference
Protein complexes identification based on go attributed network embedding
2018 · External reference
10.1137/20m1386062
10.1137/20m1386062 · External reference
10.1016/j.pep.2010.04.009
10.1016/j.pep.2010.04.009 · External reference
10.1016/j.ygeno.2013.04.010
10.1016/j.ygeno.2013.04.010 · External reference
Unresolved reference
External reference
10.1095/biolreprod58.2.302
10.1095/biolreprod58.2.302 · External reference
10.1016/j.ygeno.2019.01.011
10.1016/j.ygeno.2019.01.011 · External reference
10.1016/j.ygeno.2014.10.006
10.1016/j.ygeno.2014.10.006 · External reference
Protein complex detection using interaction reliability assessment and weighted clustering coefficient
2013 · External reference
10.1038/nature11503
10.1038/nature11503 · External reference
Construction of dynamic probabilistic protein interaction networks for protein complex identification
2016 · External reference
