Research graph
References from Computational modeling and analysis of the morphogenetic domain signaling networks regulating C. elegans embryogenesis. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1126/science.1252960
10.1126/science.1252960 · External reference
Synergistic co-regulation and competition by a SOX9-GLI-FOXA phasic transcriptional network coordinate chondrocyte differentiation transitions
2018 · External reference
10.1073/pnas.1313083111
10.1073/pnas.1313083111 · External reference
10.1007/b98868
10.1007/b98868 · External reference
10.1126/science.282.5396.2012
10.1126/science.282.5396.2012 · External reference
10.1006/geno.1997.4989
10.1006/geno.1997.4989 · External reference
10.1101/gr.10.5.703
10.1101/gr.10.5.703 · External reference
The lineaging of fluorescently-labeled Caenorhabditis elegans embryos with StarryNite and AceTree
10.1038/nprot.2006.222 · 2006 · External reference
10.1016/0012-1606(77)90158-0
10.1016/0012-1606(77)90158-0 · External reference
10.1016/0012-1606(83)90201-4
10.1016/0012-1606(83)90201-4 · External reference
10.1038/s41586-019-1352-7
10.1038/s41586-019-1352-7 · External reference
Nobel lecture. Nature's gift to science
10.1023/b:bire.0000019186.48208.f3 · 2003 · External reference
10.1016/s0955-0674(00)00204-0
10.1016/s0955-0674(00)00204-0 · External reference
10.1002/anie.200902040
10.1002/anie.200902040 · External reference
WormBook: the online review of Caenorhabditis elegans biology
10.1093/nar/gkl894 · 2007 · External reference
10.1016/j.devcel.2016.07.025
10.1016/j.devcel.2016.07.025 · External reference
A lineage-resolved molecular atlas of C. elegans embryogenesis at single-cell resolution
10.1126/science.aax1971 · 2019 · External reference
10.1038/s41592-021-01216-1
10.1038/s41592-021-01216-1 · External reference
C elegans Embryonic Morphogenesis
10.1016/bs.ctdb.2015.11.012 · 2016 · External reference
10.1038/s41586-019-1509-4
10.1038/s41586-019-1509-4 · External reference
10.1073/pnas.1610602114
10.1073/pnas.1610602114 · External reference
An image-based data-driven analysis of cellular architecture in a developing tissue
10.7554/elife.55913 · 2020 · External reference
On the evolution and development of morphological complexity: A view from gene regulatory networks
10.1371/journal.pcbi.1008570 · 2021 · External reference
10.1073/pnas.0511111103
10.1073/pnas.0511111103 · External reference
10.1038/nmeth.1228
10.1038/nmeth.1228 · External reference
A semi-local neighborhood-based framework for probabilistic cell lineage tracing
10.1186/1471-2105-15-217 · 2014 · External reference
10.1242/dev.096040
10.1242/dev.096040 · External reference
Quantitative semi-automated analysis of morphogenesis with single-cell resolution in complex embryos
10.1242/dev.086256 · 2012 · External reference
Global cell sorting in the C. elegans embryo defines a new mechanism for pattern formation
10.1016/j.ydbio.2006.03.004 · 2006 · External reference
Unresolved reference
2009 · External reference
ImageNet classification with deep convolutional neural networks
10.1145/3065386 · 2017 · External reference
10.1016/j.cell.2020.12.016
10.1016/j.cell.2020.12.016 · External reference
10.1126/science.aan3235
10.1126/science.aan3235 · External reference
10.1016/j.devcel.2018.10.016
10.1016/j.devcel.2018.10.016 · External reference
10.1083/jcb.201711006
10.1083/jcb.201711006 · External reference
10.1101/gr.131920.111
10.1101/gr.131920.111 · External reference
Systems properties and spatiotemporal regulation of cell position variability during embryogenesis
10.1016/j.celrep.2018.12.052 · 2019 · External reference
10.1126/science.1136800
10.1126/science.1136800 · External reference
How does gene expression clustering work?
10.1038/nbt1205-1499 · 2005 · External reference
10.1198/016214502760047131
10.1198/016214502760047131 · External reference
Procrustes methods in the statistical analysis of shape
10.1111/j.2517-6161.1991.tb01825.x · 1991 · External reference
Classification and regression by randomForest
2002 · External reference
Establishment of signaling interactions with cellular resolution for every cell cycle of embryogenesis
10.1534/genetics.118.300820 · 2018 · External reference
Principal component analysis
10.1016/0169-7439(87)80084-9 · 1987 · External reference
10.1093/nar/gky1055
10.1093/nar/gky1055 · External reference
10.1101/gad.1323705
10.1101/gad.1323705 · External reference
10.1016/j.celrep.2019.02.072
10.1016/j.celrep.2019.02.072 · External reference
10.1242/dev.121.10.3417
10.1242/dev.121.10.3417 · External reference
An innexin-dependent cell network establishes left-right neuronal asymmetry in C. elegans
10.1016/j.cell.2007.02.052 · 2007 · External reference
Features of embryonic induction
10.1242/dev.104.3.341 · 1988 · External reference
10.1038/s41576-021-00342-y
10.1038/s41576-021-00342-y · External reference
Quantitative Differences in Nuclear β-catenin and TCF Pattern Embryonic Cells in C. elegans
10.1371/journal.pgen.1005585 · 2015 · External reference
10.1016/0092-8674(95)90317-8
10.1016/0092-8674(95)90317-8 · External reference
Data-theoretical synthesis of the early developmental process
2021 · External reference
10.1002/dvg.22928
10.1002/dvg.22928 · External reference
Establishment of a morphological atlas of the Caenorhabditis elegans embryo using deep-learning-based 4D segmentation
10.1038/s41467-020-19863-x · 2020 · External reference
10.1016/s0168-9525(99)01750-3
10.1016/s0168-9525(99)01750-3 · External reference
10.1242/dev.01774
10.1242/dev.01774 · External reference
mTOR signaling at a glance
10.1242/jcs.051011 · 2009 · External reference
10.1016/s0945-053x(00)00064-0
10.1016/s0945-053x(00)00064-0 · External reference
Characterization of beta pat-3 heterodimers, a family of essential integrin receptors in C. elegans
10.1083/jcb.129.4.1127 · 1995 · External reference
Role of the extracellular matrix in epithelial morphogenesis: a view from C. elegans
10.4161/org.20261 · 2012 · External reference
TGF-β signaling can act from multiple tissues to regulate C. elegans body size
10.1186/s12861-014-0043-8 · 2014 · External reference
Notch signaling in the C. elegans embryo
2005 · External reference
Essential role for Notch signaling in restricting developmental plasticity
10.1101/gad.199588.112 · 2012 · External reference
10.1016/j.devcel.2008.01.019
10.1016/j.devcel.2008.01.019 · External reference
10.18632/oncotarget.12177
10.18632/oncotarget.12177 · External reference
10.1038/nrm1149
10.1038/nrm1149 · External reference
MAP kinase signaling antagonizes PAR-1 function during polarization of the early Caenorhabditis elegans embryo
10.1534/genetics.109.106716 · 2009 · External reference
Synaptic polarity depends on phosphatidylinositol signaling regulated by myo-inositol monophosphatase in Caenorhabditis elegans
10.1534/genetics.111.137844 · 2012 · External reference
Muscle functions as a connective tissue and source of extracellular matrix in planarians
10.1038/s41467-019-09539-6 · 2019 · External reference
10.3892/br.2014.401
10.3892/br.2014.401 · External reference
A high-content imaging approach to profile C. elegans embryonic development
10.1242/dev.174029 · 2019 · External reference
10.1242/dev.127.20.4419
10.1242/dev.127.20.4419 · External reference
10.1016/s1534-5807(02)00185-5
10.1016/s1534-5807(02)00185-5 · External reference
10.1016/j.ydbio.2012.11.034
10.1016/j.ydbio.2012.11.034 · External reference
10.1016/j.cell.2018.09.031
10.1016/j.cell.2018.09.031 · External reference
10.1016/j.devcel.2015.12.028
10.1016/j.devcel.2015.12.028 · External reference
