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References from Population genomic analyses reveal evidence for limited recombination in the superbug Candida auris in nature. Local targets link to admitted publications; unresolved targets remain external evidence.
Candida auris sp. nov., a novel ascomycetous yeast isolated from the external ear canal of an inpatient in a Japanese hospital
10.1111/j.1348-0421.2008.00083.x · 2009 · External reference
Screening for Candida auris in patients admitted to eight intensive care units in England, 2017 to 2018
10.2807/1560-7917.es.2021.26.8.1900730 · 2021 · External reference
Evaluating the measures taken to contain a Candida auris outbreak in a tertiary care hospital in South India: an outbreak investigational study
10.1186/s12879-021-06131-6 · 2021 · External reference
Axillary digital thermometers uplifted a multidrug-susceptible Candida auris outbreak among COVID-19 patients in Brazil
10.1111/myc.13320 · 2021 · External reference
Genomic epidemiology of Candida auris in Qatar reveals hospital transmission dynamics and a South Asian origin
10.3390/jof7030240 · 2021 · External reference
Bloodstream infections with Candida auris among children in Colombia: clinical characteristics and outcomes of 34 cases
10.1093/jpids/piaa038 · 2021 · External reference
Management of Candida auris outbreak in a tertiary-care setting in Saudi Arabia
10.1017/ice.2020.414 · 2021 · External reference
Candida auris infections in China
10.1080/21505594.2022.2054120 · 2022 · External reference
First fluconazole-resistant Candida auris isolated from fungal otitis in Iran
2021 · External reference
Outbreak of Candida auris infection in a COVID-19 hospital in Mexico
10.1016/j.cmi.2020.12.030 · 2021 · External reference
Candida auris outbreak in a COVID-19 specialty care unit — Florida, July–August 2020
10.15585/mmwr.mm7002e3 · 2021 · External reference
Biofilm formation and genotyping of Candida haemulonii, Candida pseudohaemulonii, and a proposed new species (Candida auris) isolates from Korea
10.3109/13693786.2010.493563 · 2010 · External reference
10.1128/msphere.00189-16
10.1128/msphere.00189-16 · External reference
10.1038/s41426-018-0187-x
10.1038/s41426-018-0187-x · External reference
Environmental isolation of Candida auris from the coastal wetlands of Andaman islands, India
10.1128/mbio.03181-20 · 2021 · External reference
10.1371/journal.ppat.1006290
10.1371/journal.ppat.1006290 · External reference
Unresolved reference
External reference
10.1128/mbio.03364-19
10.1128/mbio.03364-19 · External reference
Potential fifth clade of Candida auris, Iran, 2018
10.3201/eid2509.190686 · 2019 · External reference
10.1038/s41467-018-07779-6
10.1038/s41467-018-07779-6 · External reference
Simultaneous emergence of multidrug-resistant Candida auris on 3 continents confirmed by whole-genome sequencing and epidemiological analyses
10.1093/cid/ciw691 · 2017 · External reference
ABC transporter genes show upregulated expression in drug-resistant clinical isolates of Candida auris: a genome-wide characterization of ATP-binding cassette (ABC) transporter genes
10.3389/fmicb.2019.01445 · 2019 · External reference
10.1128/msphere.00151-20
10.1128/msphere.00151-20 · External reference
10.1016/j.cub.2009.04.058
10.1016/j.cub.2009.04.058 · External reference
10.1038/nature12891
10.1038/nature12891 · External reference
A chronic autochthonous fifth clade case of Candida auris otomycosis in Iran
10.1007/s11046-021-00605-6 · 2022 · External reference
Candida auris in Germany and previous exposure to foreign healthcare
10.3201/eid2509.190262 · 2019 · External reference
Isolates of the emerging pathogen Candida auris present in the UK have several geographic origins
10.1093/mmy/myw147 · 2017 · External reference
10.1371/journal.ppat.1009094
10.1371/journal.ppat.1009094 · External reference
10.1016/j.fgb.2006.10.002
10.1016/j.fgb.2006.10.002 · External reference
Plasticity of mitochondrial DNA inheritance and its impact on nuclear gene transcription in yeast hybrids
10.3390/microorganisms8040494 · 2020 · External reference
Uniparental inheritance of mitochondrial genes in yeast: dependence on input bias of mitochondrial DNA and preliminary investigations of the mechanism
10.1093/genetics/89.4.615 · 1978 · External reference
The inheritance of genes in mitochondria and chloroplasts: laws, mechanisms, and models
10.1146/annurev.genet.35.102401.090231 · 2003 · External reference
Current perspectives on mitochondrial inheritance in fungi
10.2147/chc.s59508 · 2015 · External reference
The first two cases of Candida auris in the Netherlands
10.3390/jof5040091 · 2019 · External reference
Draft genome sequence of a fluconazole-resistant Candida auris strain from a candidemia patient in India
10.1128/genomea.00722-15 · 2015 · External reference
Candida auris on apples: diversity and clinical significance
10.1128/mbio.00518-22 · 2022 · External reference
GERMS-SA for. In vitro antifungal activity of manogepix and other antifungal agents against South African Candida auris isolates from bloodstream infections. Microbiology
2022 · External reference
10.1038/s41591-021-01383-w
10.1038/s41591-021-01383-w · External reference
Draft genome of a commonly misdiagnosed multidrug resistant pathogen Candida auris
10.1186/s12864-015-1863-z · 2015 · External reference
Candida auris sternal osteomyelitis in a man from Kenya visiting Australia
10.3201/eid2501.181321 · 2019 · External reference
10.1371/journal.pone.0223433
10.1371/journal.pone.0223433 · External reference
Genomic epidemiology of the UK outbreak of the emerging human fungal pathogen Candida auris article
2018 · External reference
Draft genome sequences of 19 clinical isolates of Candida auris from Hong Kong
2021 · External reference
Sentinel case of Candida auris in the Western United States following prolonged occult colonization in a returned traveler from India
10.1089/mdr.2018.0408 · 2019 · External reference
Whole genome sequence of first Candida auris strain, isolated in Russia
10.1093/mmy/myz078 · 2020 · External reference
10.1016/j.nmni.2016.07.003
10.1016/j.nmni.2016.07.003 · External reference
Candida auris in Singapore: Genomic epidemiology, antifungal drug resistance, and identification using the updated 8.01 VITEK ®2 system
10.1016/j.ijantimicag.2019.09.016 · 2019 · External reference
10.1093/mmy/myab079
10.1093/mmy/myab079 · External reference
Genomic epidemiology of Candida auris in a general hospital in Shenyang, China: a three-year surveillance study
10.1080/22221751.2021.1934557 · 2021 · External reference
A Candida auris outbreak and its control in an intensive care setting
10.1056/nejmoa1714373 · 2018 · External reference
10.1093/cid/ciy411
10.1093/cid/ciy411 · External reference
Colonisation and transmission dynamics of Candida auris among chronic respiratory diseases patients hospitalised in a chest hospital, Delhi, India: a comparative analysis of whole genome sequencing and microsatellite typing
10.3390/jof7020081 · 2021 · External reference
10.1016/s1473-3099(18)30597-8
10.1016/s1473-3099(18)30597-8 · External reference
Genomic characterizations of clade III lineage of Candida auris, California, USA
10.3201/eid2704.204361 · 2021 · External reference
10.3390/jof7020140
10.3390/jof7020140 · External reference
Genetic heterogeneity of Australian Candida auris isolates: insights from a nonoutbreak setting using whole-genome sequencing
10.1093/ofid/ofaa158 · 2020 · External reference
NOVOPlasty: de novo assembly of organelle genomes from whole genome data
2017 · External reference
NASP: an accurate, rapid method for the identification of SNPs in WGS datasets that supports flexible input and output formats
2016 · External reference
10.1093/bioinformatics/btu170
10.1093/bioinformatics/btu170 · External reference
Aligning sequence reads, clone sequences and assembly contigs with BWA-MEM
2013 · External reference
10.1101/gr.107524.110
10.1101/gr.107524.110 · External reference
10.1371/journal.pone.0009490
10.1371/journal.pone.0009490 · External reference
Is natural population of Candida tropicalis sexual, parasexual, and/or asexual?
2021 · External reference
Unresolved reference
External reference
Controlling the false discovery rate: a practical and powerful approach to multiple testing
10.1111/j.2517-6161.1995.tb02031.x · 1995 · External reference
10.1101/gr.092759.109
10.1101/gr.092759.109 · External reference
10.4161/fly.19695
10.4161/fly.19695 · External reference
Mitochondrial genome sequences of the emerging fungal pathogen Candida auris
10.3389/fmicb.2020.560332 · 2020 · External reference
10.1093/nar/gkw924
10.1093/nar/gkw924 · External reference
Divergence, hybridization, and recombination in the mitochondrial genome of the human pathogenic yeast Cryptococcus gattii
10.1111/j.1365-294x.2009.04227.x · 2009 · External reference
10.1007/s00253-018-9350-5
10.1007/s00253-018-9350-5 · External reference
Mitochondrial multilocus DNA sequence analyses reveal limited genetic variability within and consistent differences between species of the global Matsutake species complex
2020 · External reference
mtDNA recombination in a natural population
10.1073/pnas.95.3.1331 · 1998 · External reference
Mitochondrial recombination in natural populations of the button mushroom Agaricus bisporus
10.1016/j.fgb.2012.09.004 · 2013 · External reference
Structure, gene flow, and recombination among geographic populations of a Russula virescens ally from Southwestern China
10.1371/journal.pone.0073174 · 2013 · External reference
10.1016/j.fgb.2014.08.008
10.1016/j.fgb.2014.08.008 · External reference
10.1534/genetics.111.133363
10.1534/genetics.111.133363 · External reference
TORC1 signaling regulates cytoplasmic pH through Sir2 in yeast
10.1111/acel.13151 · 2020 · External reference
Transcription factors in fungi
10.1111/j.1574-6968.2008.01293.x · 2008 · External reference
10.1016/j.fbr.2014.07.001
10.1016/j.fbr.2014.07.001 · External reference
10.1371/journal.ppat.1002525
10.1371/journal.ppat.1002525 · External reference
Filamentous growth of Candida albicans in response to physical environmental cues and its regulation by the unique CZF1 gene
10.1046/j.1365-2958.1999.01619.x · 1999 · External reference
10.1016/j.cell.2011.10.048
10.1016/j.cell.2011.10.048 · External reference
Dominant negative selection of heterologous genes: isolation of Candida albicans genes that interfere with Saccharomyces cerevisiae mating factor-induced cell cycle arrest
10.1073/pnas.89.20.9410 · 1992 · External reference
Interlocking transcriptional feedback loops control white-opaque Switching in Candida albicans
10.1371/journal.pbio.0050256 · 2007 · External reference