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References from Evaluating the performance of random forest and iterative random forest based methods when applied to gene expression data. Local targets link to admitted publications; unresolved targets remain external evidence.
Wgcna: an r package for weighted correlation network analysis
10.1186/1471-2105-9-559 · 2008 · External reference
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Wisdom of crowds for robust gene network inference
10.1038/nmeth.2016 · 2012 · External reference
Iterative random forests to discover predictive and stable high-order interactions
10.1073/pnas.1711236115 · 2018 · External reference
Random intersection trees
2014 · External reference
10.1016/j.cell.2016.06.044
10.1016/j.cell.2016.06.044 · External reference
The 1001 genomes project for arabidopsis thaliana
10.1186/gb-2009-10-5-107 · 2009 · External reference
10.1126/science.1128691
10.1126/science.1128691 · External reference
10.3390/genes10120996
10.3390/genes10120996 · External reference
10.1038/nmeth.4463
10.1038/nmeth.4463 · External reference
10.1093/bioinformatics/bts635
10.1093/bioinformatics/bts635 · External reference
Gene length corrected trimmed mean of m-values (getmm) processing of rna-seq data performs similarly in intersample analyses while improving intrasample comparisons
10.1186/s12859-018-2246-7 · 2018 · External reference
Unresolved reference
2021 · External reference
Regulondb version 7.0: transcriptional regulation of escherichia coli k-12 integrated within genetic sensory response units (gensor units)
10.1093/nar/gkq1110 · 2010 · External reference
10.1038/ng2012
10.1038/ng2012 · External reference
An improved map of conserved regulatory sites for saccharomyces cerevisiae
10.1186/1471-2105-7-113 · 2006 · External reference
10.1093/molbev/msv058
10.1093/molbev/msv058 · External reference
Aracyc: a biochemical pathway database for arabidopsis
10.1104/pp.102.017236 · 2003 · External reference
Plant metabolic network 15: A resource of genome-wide metabolism databases for 126 plants and algae
10.1101/2021.03.30.437738 · 2021 · External reference
Cumulated gain-based evaluation of ir techniques
10.1145/582415.582418 · 2002 · External reference
Transcriptional dynamics of two seed compartments with opposing roles in arabidopsis seed germination
10.1104/pp.113.223511 · 2013 · External reference
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10.1093/nar/28.1.27 · External reference
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10.1007/s11103-015-0297-y · External reference
The gibberellin signaling negative regulator rga-like3 promotes seed storage protein accumulation
10.1093/plphys/kiaa114 · 2021 · External reference
Global expression analysis of nucleotide binding site-leucine rich repeat-encoding and related genes in arabidopsis
2007 · External reference
Threshold selection in gene co-expression networks using spectral graph theory techniques
10.1186/1471-2105-10-s11-s4 · 2009 · External reference
Random walk with restart: fast solutions and applications
10.1007/s10115-007-0094-2 · 2008 · External reference
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10.1104/pp.109.151845 · External reference
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New function of hypoxia-responsive unknown protein in enhanced resistance to biotic stress
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