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References from MSPJ: Discovering potential biomarkers in small gene expression datasets via ensemble learning. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nrg.2016.10
10.1038/nrg.2016.10 · External reference
10.1001/jamaneurol.2017.0357
10.1001/jamaneurol.2017.0357 · External reference
10.1111/febs.15051
10.1111/febs.15051 · External reference
Genome editing reveals fitness effects of a gene for sexual dichromatism in Sulawesian fishes
10.1038/s41467-021-21697-0 · 2021 · External reference
Elucidating gene expression adaptation of phylogenetically divergent coral holobionts under heat stress
10.1038/s41467-021-25950-4 · 2021 · External reference
Signatures of selection in recently domesticated macadamia
10.1038/s41467-021-27937-7 · 2022 · External reference
10.1038/nrn3475
10.1038/nrn3475 · External reference
10.1158/0008-5472.can-07-1601
10.1158/0008-5472.can-07-1601 · External reference
10.1038/ncomms15180
10.1038/ncomms15180 · External reference
Sample size estimates for cluster-randomized trials in hospital infection control and antimicrobial stewardship
10.1001/jamanetworkopen.2019.12644 · 2019 · External reference
A consensus guide to capturing the ability to inhibit actions and impulsive behaviors in the stop-signal task
10.7554/elife.46323 · 2019 · External reference
Estimating misclassification error with small samples via bootstrap cross-validation
10.1093/bioinformatics/bti294 · 2005 · External reference
Intensity dependent estimation of noise in microarrays improves detection of differentially expressed genes
10.1186/1471-2105-11-400 · 2010 · External reference
10.1093/bioinformatics/btz627
10.1093/bioinformatics/btz627 · External reference
10.1093/bioinformatics/btl476
10.1093/bioinformatics/btl476 · External reference
ShrinkBayes: a versatile R-package for analysis of count-based sequencing data in complex study designs
10.1186/1471-2105-15-116 · 2014 · External reference
Prediction of cancer outcome with microarrays: a multiple random validation strategy
10.1016/s0140-6736(05)17866-0 · 2005 · External reference
10.1093/nar/gkw797
10.1093/nar/gkw797 · External reference
10.1146/annurev-genom-091212-153520
10.1146/annurev-genom-091212-153520 · External reference
10.1016/j.neuroimage.2014.01.060
10.1016/j.neuroimage.2014.01.060 · External reference
Consistent gene signature of schizophrenia identified by a novel feature selection strategy from comprehensive sets of transcriptomic data
10.1093/bib/bbz049 · 2020 · External reference
Distribution of IgG galactosylation as a promising biomarker for cancer screening in multiple cancer types
10.1038/cr.2016.83 · 2016 · External reference
10.1038/nbt.4096
10.1038/nbt.4096 · External reference
Evaluation of Differences in Individual Treatment Response in Schizophrenia Spectrum Disorders: A Meta-analysis
10.1001/jamapsychiatry.2019.1530 · 2019 · External reference
Improving the performance of SVM-RFE to select genes in microarray data
10.1186/1471-2105-7-s2-s12 · 2006 · External reference
Testing for differentially expressed genes with microarray data
10.1093/nar/gng052 · 2003 · External reference
Estimating p-values in small microarray experiments
10.1093/bioinformatics/btl548 · 2007 · External reference
meta: An R Package for Meta-Analysis
2007 · External reference
Development of two-stage SVM-RFE gene selection strategy for microarray expression data analysis
10.1109/tcbb.2007.1028 · 2007 · External reference
A flexible microarray data simulation model
10.3390/microarrays2020115 · 2013 · External reference
SPsimSeq: semi-parametric simulation of bulk and single-cell RNA-sequencing data
10.1093/bioinformatics/btaa105 · 2020 · External reference
10.1093/bioinformatics/btg405
10.1093/bioinformatics/btg405 · External reference
10.1038/nmeth.3871
10.1038/nmeth.3871 · External reference
preprocessCore: a collection of pre-processing functions
2013 · External reference
10.1093/nar/gkv007
10.1093/nar/gkv007 · External reference
10.1073/pnas.091062498
10.1073/pnas.091062498 · External reference
Unresolved reference
2005 · External reference
RankProd 2.0: a refactored bioconductor package for detecting differentially expressed features in molecular profiling datasets
10.1093/bioinformatics/btx292 · 2017 · External reference
KnowSeq R-Bioc package: The automatic smart gene expression tool for retrieving relevant biological knowledge
10.1016/j.compbiomed.2021.104387 · 2021 · External reference
Unresolved reference
External reference
Random forests
10.1023/a:1010933404324 · 2001 · External reference
Benchmark of filter methods for feature selection in high-dimensional gene expression survival data
10.1093/bib/bbab354 · 2022 · External reference
A new COVID-19 Patients Detection Strategy (CPDS) based on hybrid feature selection and enhanced KNN classifier
10.1016/j.knosys.2020.106270 · 2020 · External reference
Biased random forest for dealing with the class imbalance problem
10.1109/tnnls.2018.2878400 · 2019 · External reference
10.1016/j.xinn.2021.100141
10.1016/j.xinn.2021.100141 · External reference
Package ‘e1071’
2019 · External reference
10.1093/bioinformatics/bti623
10.1093/bioinformatics/bti623 · External reference
A complexity-bounded motion estimation algorithm
10.1109/tip.2002.999673 · 2002 · External reference
10.1038/s41587-019-0071-9
10.1038/s41587-019-0071-9 · External reference
10.1016/j.ccr.2009.07.016
10.1016/j.ccr.2009.07.016 · External reference
10.1038/nature09715
10.1038/nature09715 · External reference
10.1371/journal.pone.0001651
10.1371/journal.pone.0001651 · External reference
10.1186/s12859-019-2599-6
10.1186/s12859-019-2599-6 · External reference
scDEA: differential expression analysis in single-cell RNA-sequencing data via ensemble learning
2022 · External reference
EMA - A R package for Easy Microarray data analysis
10.1186/1756-0500-3-277 · 2010 · External reference
Random forest versus logistic regression: a large-scale benchmark experiment
10.1186/s12859-018-2264-5 · 2018 · External reference
10.1016/j.ygeno.2019.11.004
10.1016/j.ygeno.2019.11.004 · External reference
Nonnegative principal component analysis for cancer molecular pattern discovery
10.1109/tcbb.2009.36 · 2009 · External reference
Analysis of transcript-deleterious variants in Mendelian disorders: implications for RNA-based diagnostics
10.1186/s13059-020-02053-9 · 2020 · External reference
Improving the Mann-Whitney statistical test for feature selection: an approach in breast cancer diagnosis on mammography
10.1016/j.artmed.2014.12.004 · 2015 · External reference
SABR for operable stage I non-small-cell lung cancer: comparison to surgery
10.1016/s1470-2045(21)00656-2 · 2021 · External reference
