Research graph
References from Detecting RNA modification using direct RNA sequencing: A systematic review. Local targets link to admitted publications; unresolved targets remain external evidence.
A molecular-level perspective on the frequency, distribution, and consequences of messenger RNA modifications
10.1002/wrna.1586 · 2020 · External reference
10.1038/s12276-020-0407-z
10.1038/s12276-020-0407-z · External reference
10.15252/embj.2020105977
10.15252/embj.2020105977 · External reference
10.1038/nrm.2016.163
10.1038/nrm.2016.163 · External reference
The importance of being modified: the role of RNA modifications in translational fidelity
2017 · External reference
10.15252/msb.20199275
10.15252/msb.20199275 · External reference
10.1002/wrna.1595
10.1002/wrna.1595 · External reference
10.1080/15476286.2017.1282025
10.1080/15476286.2017.1282025 · External reference
10.1038/nature12730
10.1038/nature12730 · External reference
5' UTR m(6)A promotes cap-independent translation
10.1016/j.cell.2015.10.012 · 2015 · External reference
m(6)A: signaling for mRNA splicing
10.1080/15476286.2016.1201628 · 2016 · External reference
10.1038/s41392-020-00450-x
10.1038/s41392-020-00450-x · External reference
10.1016/j.biopha.2019.108613
10.1016/j.biopha.2019.108613 · External reference
10.1038/nature24456
10.1038/nature24456 · External reference
10.1038/nchembio.2040
10.1038/nchembio.2040 · External reference
10.1038/nrm4040
10.1038/nrm4040 · External reference
10.1146/annurev-genet-112618-043830
10.1146/annurev-genet-112618-043830 · External reference
10.1093/nar/gkt1330
10.1093/nar/gkt1330 · External reference
10.3390/genes10020117
10.3390/genes10020117 · External reference
Modification of messenger RNA by 2'-O-methylation regulates gene expression in vivo
10.1038/s41467-019-11375-7 · 2019 · External reference
Accurate detection of m(6)A RNA modifications in native RNA sequences
10.1038/s41467-019-11713-9 · 2019 · External reference
10.1016/j.bbagrm.2018.10.012
10.1016/j.bbagrm.2018.10.012 · External reference
The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
10.1186/s13059-016-1103-0 · 2016 · External reference
10.1038/nmeth.4577
10.1038/nmeth.4577 · External reference
10.1016/j.gpb.2016.05.004
10.1016/j.gpb.2016.05.004 · External reference
Identification of differential RNA modifications from nanopore direct RNA sequencing with xPore
10.1038/s41587-021-00949-w · 2021 · External reference
10.1186/s13059-019-1727-y
10.1186/s13059-019-1727-y · External reference
DeepNano: deep recurrent neural networks for base calling in MinION nanopore reads
10.1371/journal.pone.0178751 · 2017 · External reference
Beyond sequencing: machine learning algorithms extract biology hidden in Nanopore signal data
10.1016/j.tig.2021.09.001 · 2022 · External reference
Gaussian mixture model-based unsupervised nucleotide modification number detection using nanopore-sequencing readouts
10.1093/bioinformatics/btaa601 · 2020 · External reference
EpiNano: detection of m(6)A RNA modifications using oxford nanopore direct RNA sequencing
10.1007/978-1-0716-1374-0_3 · 2021 · External reference
10.1101/gr.257857.119
10.1101/gr.257857.119 · External reference
Nanopore direct RNA sequencing maps the complexity of Arabidopsis mRNA processing and m(6)A modification
10.7554/elife.49658 · 2020 · External reference
10.1261/rna.072785.119
10.1261/rna.072785.119 · External reference
RNA modifications detection by comparative Nanopore direct RNA sequencing
10.1038/s41467-021-27393-3 · 2021 · External reference
10.1093/nar/gkaa620
10.1093/nar/gkaa620 · External reference
Quantitative profiling of N6-methyladenosine at single-base resolution in stem-differentiating xylem of Populus trichocarpa using Nanopore direct RNA sequencing
10.1186/s13059-020-02241-7 · 2021 · External reference
10.1038/s41587-021-00915-6
10.1038/s41587-021-00915-6 · External reference
Direct RNA sequencing reveals m(6)A modifications on adenovirus RNA are necessary for efficient splicing
10.1038/s41467-020-19787-6 · 2020 · External reference
10.1101/2020.09.13.295089
10.1101/2020.09.13.295089 · External reference
Unresolved reference
External reference
10.1101/2021.03.31.437901
10.1101/2021.03.31.437901 · External reference
10.1101/2021.09.20.461055
10.1101/2021.09.20.461055 · External reference
DENA: training an authentic neural network model using Nanopore sequencing data of Arabidopsis transcripts for detection and quantification of N6-methyladenosine on RNA
10.1186/s13059-021-02598-3 · 2022 · External reference
10.1101/843136
10.1101/843136 · External reference
10.1101/2022.06.03.494690
10.1101/2022.06.03.494690 · External reference
DRUMMER-Rapid detection of RNA modifications through comparative nanopore sequencing
2022 · External reference
