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References from A novel workflow for the qualitative analysis of DNA methylation data. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nrg3354
10.1038/nrg3354 · External reference
DNA methylation reprogramming during mammalian development
2019 · External reference
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10.1038/nrg3230 · External reference
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10.1038/s41559-020-01371-2 · External reference
10.1016/j.molcel.2021.01.011
10.1016/j.molcel.2021.01.011 · External reference
DNA methylation dynamics in cellular commitment and differentiation
2016 · External reference
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10.1038/ng.2442 · External reference
Tracing and tracking epiallele families in complex DNA populations
10.1093/nargab/lqaa096 · 2020 · External reference
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10.1038/ng.298 · External reference
10.1016/j.gendis.2018.01.002
10.1016/j.gendis.2018.01.002 · External reference
Huntington’s disease accelerates epigenetic aging of human brain and disrupts DNA methylation levels
10.18632/aging.101005 · 2016 · External reference
10.1016/j.molmed.2013.07.007
10.1016/j.molmed.2013.07.007 · External reference
Quantitative comparison of within-sample heterogeneity scores for DNA methylation data
10.1093/nar/gkaa120 · 2020 · External reference
Quantification of tumour evolution and heterogeneity via Bayesian epiallele detection
10.1186/s12859-017-1753-2 · 2017 · External reference
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10.1080/15592294.2016.1246108 · External reference
Epigenome chaos: stochastic and deterministic DNA methylation events drive cancer evolution
2021 · External reference
Detection of haplotype-dependent allele-specific DNA methylation in WGBS data
10.1038/s41467-020-19077-1 · 2020 · External reference
Dynamic evolution of clonal epialleles revealed by methclone
10.1186/s13059-014-0472-5 · 2014 · External reference
10.1093/bioinformatics/btz327
10.1093/bioinformatics/btz327 · External reference
Targeted DNA methylation analysis by next-generation sequencing
2015 · External reference
10.1093/nar/gki901
10.1093/nar/gki901 · External reference
ampliMethProfiler: a pipeline for the analysis of CpG methylation profiles of targeted deep bisulfite sequenced amplicons
10.1186/s12859-016-1380-3 · 2016 · External reference
The DNA methylation haplotype (mHap) format and mHapTools
2021 · External reference
10.1093/nar/gkx518
10.1093/nar/gkx518 · External reference
Unresolved reference
External reference
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
10.1093/bioinformatics/btv145 · 2015 · External reference
10.1186/gb-2012-13-10-r87
10.1186/gb-2012-13-10-r87 · External reference
DNA methylation study of Huntington’s disease and motor progression in patients and in animal models
10.1038/s41467-020-18255-5 · 2020 · External reference
Rrs1 is involved in endoplasmic reticulum stress response in Huntington disease
10.1074/jbc.m109.018325 · 2009 · External reference
10.1093/nar/gkz369
10.1093/nar/gkz369 · External reference
10.1007/s12035-017-0477-7
10.1007/s12035-017-0477-7 · External reference
Glutathione redox cycle dysregulation in Huntington’s disease knock-in striatal cells
10.1016/j.freeradbiomed.2012.09.004 · 2012 · External reference
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10.3233/jhd-200394 · External reference
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10.1212/wnl.0000000000009364 · External reference
CTCF and cellular heterogeneity
10.1186/s13578-019-0347-2 · 2019 · External reference
10.1016/j.molcel.2017.08.026
10.1016/j.molcel.2017.08.026 · External reference
