Research graph
References from EpiCas-DL : Predicting sgRNA activity for CRISPR-mediated epigenome editing by deep learning. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1126/science.aat5011
10.1126/science.aat5011 · External reference
10.1038/nature17946
10.1038/nature17946 · External reference
10.1038/nature24644
10.1038/nature24644 · External reference
10.1038/s41586-019-1711-4
10.1038/s41586-019-1711-4 · External reference
10.1038/nmeth.3312
10.1038/nmeth.3312 · External reference
10.1016/j.cell.2013.06.044
10.1016/j.cell.2013.06.044 · External reference
10.1038/nature14136
10.1038/nature14136 · External reference
10.1126/science.1246981
10.1126/science.1246981 · External reference
10.1016/j.cell.2014.11.052
10.1016/j.cell.2014.11.052 · External reference
10.1016/j.cell.2016.09.006
10.1016/j.cell.2016.09.006 · External reference
10.1038/s41556-020-00620-7
10.1038/s41556-020-00620-7 · External reference
10.1016/j.cell.2021.03.025
10.1016/j.cell.2021.03.025 · External reference
10.1038/nbt.3026
10.1038/nbt.3026 · External reference
10.1186/s13059-018-1459-4
10.1186/s13059-018-1459-4 · External reference
10.1038/s41467-019-12281-8
10.1038/s41467-019-12281-8 · External reference
10.1126/sciadv.aax9249
10.1126/sciadv.aax9249 · External reference
Genome dependent Cas9/gRNA search time underlies sequence dependent gRNA activity
10.1038/s41467-021-25339-3 · 2021 · External reference
Nucleosomes impede Cas9 access to DNA in vivo and in vitro
2016 · External reference
10.1038/nbt.4061
10.1038/nbt.4061 · External reference
Compact and highly active next-generation libraries for CRISPR-mediated gene repression and activation
2016 · External reference
10.1016/j.cell.2014.09.029
10.1016/j.cell.2014.09.029 · External reference
10.1038/nature13182
10.1038/nature13182 · External reference
10.1093/nar/gkw583
10.1093/nar/gkw583 · External reference
10.1093/nar/gkaa943
10.1093/nar/gkaa943 · External reference
Unresolved reference
External reference
10.1038/s42256-019-0138-9
10.1038/s42256-019-0138-9 · External reference
Unresolved reference
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10.1016/j.biopsych.2020.09.016
10.1016/j.biopsych.2020.09.016 · External reference
10.1101/gr.136101.111
10.1101/gr.136101.111 · External reference
Single-cell microRNA-mRNA co-sequencing reveals non-genetic heterogeneity and mechanisms of microRNA regulation
10.1038/s41467-018-07981-6 · 2019 · External reference
10.1016/j.celrep.2015.02.001
10.1016/j.celrep.2015.02.001 · External reference
Reproducible inference of transcription factor footprints in ATAC-seq and DNase-seq datasets using protocol-specific bias modeling
10.1186/s13059-019-1654-y · 2019 · External reference
Systematic evaluation of CRISPR-Cas systems reveals design principles for genome editing in human cells
10.1186/s13059-018-1445-x · 2018 · External reference
Unresolved reference
External reference
10.1021/acssynbio.5b00299
10.1021/acssynbio.5b00299 · External reference
Unresolved reference
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Unresolved reference
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10.1371/journal.pcbi.1007480
10.1371/journal.pcbi.1007480 · External reference
Deep learning improves the ability of sgRNA off-target propensity prediction
10.1186/s12859-020-3395-z · 2020 · External reference
10.1089/crispr.2020.0065
10.1089/crispr.2020.0065 · External reference
Banzhaf random forests: cooperative game theory based random forests with consistency
10.1016/j.neunet.2018.06.006 · 2018 · External reference
10.1214/aos/1013203451
10.1214/aos/1013203451 · External reference
10.1016/j.csbj.2020.01.013 · Admitted local publication
CRISPR/Cas9 gRNA activity depends on free energy changes and on the target PAM context
10.1038/s41467-022-30515-0 · 2022 · External reference
10.1186/s13059-018-1534-x
10.1186/s13059-018-1534-x · External reference
Enhancing CRISPR-Cas9 gRNA efficiency prediction by data integration and deep learning
10.1038/s41467-021-23576-0 · 2021 · External reference
Unresolved reference
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10.1101/gr.191452.115
10.1101/gr.191452.115 · External reference
10.1021/acs.jcim.8b00368
10.1021/acs.jcim.8b00368 · External reference
Unresolved reference
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10.1093/nar/gkaa294
10.1093/nar/gkaa294 · External reference
10.1038/nbt.2889
10.1038/nbt.2889 · External reference
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