Contact and support
Need help, have a question, or want to contact the ResearchHub team?
© 2026 ResearchHub. Built for responsible scholarly connection.
Privacy-aware community infrastructureResearch graph
References from In Silico discovery of aptamers with an enhanced library design strategy. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1021/acs.jctc.5b00707
10.1021/acs.jctc.5b00707 · External reference
10.1016/j.ab.2018.03.004
10.1016/j.ab.2018.03.004 · External reference
10.1021/acs.analchem.0c01394
10.1021/acs.analchem.0c01394 · External reference
10.1021/acs.jpclett.6b02769
10.1021/acs.jpclett.6b02769 · External reference
10.1021/ac400366b
10.1021/ac400366b · External reference
10.1038/nchembio.1561
10.1038/nchembio.1561 · External reference
10.1021/ja508478x
10.1021/ja508478x · External reference
10.1021/cb500499x
10.1021/cb500499x · External reference
10.1038/s41587-019-0249-1
10.1038/s41587-019-0249-1 · External reference
Structure-based investigation of fluorogenic Pepper aptamer
2021 · External reference
10.1016/j.bioeng.2007.06.001
10.1016/j.bioeng.2007.06.001 · External reference
Generative aptamer discovery using RaptGen
2022 · External reference
10.1021/acs.analchem.9b05203
10.1021/acs.analchem.9b05203 · External reference
Identification of a 14mer RNA that recognizes and binds flavin mononucleotide with high affinity
10.1093/nar/gki992 · 2005 · External reference
10.1093/nar/gkg595
10.1093/nar/gkg595 · External reference
ViennaRNA Package 2.0
10.1186/1748-7188-6-26 · 2011 · External reference
New functionality of RNAComposer: an application to shape the axis of miR160 precursor structure
2016 · External reference
10.1093/nar/gkv1479
10.1093/nar/gkv1479 · External reference
10.1021/jm0306430
10.1021/jm0306430 · External reference
10.1002/jcc.23905
10.1002/jcc.23905 · External reference
10.1021/acs.jctc.6b00578
10.1021/acs.jctc.6b00578 · External reference
10.1261/rna.546207
10.1261/rna.546207 · External reference
Computational prediction of non-enzymatic RNA degradation patterns
2016 · External reference
10.1093/nar/gkab294
10.1093/nar/gkab294 · External reference
10.1021/ja028383j
10.1021/ja028383j · External reference
10.1021/acs.jctc.1c00302
10.1021/acs.jctc.1c00302 · External reference
GROMACS: High performance molecular simulations through multi-level parallelism from laptops to supercomputers - ScienceDirect
2015 · External reference
Refinement of the AMBER Force Field for Nucleic Acids: Improving the Description of α / γ Conformers
2007 · External reference
10.1186/1756-0500-5-367
10.1186/1756-0500-5-367 · External reference
10.1002/jcc.20035
10.1002/jcc.20035 · External reference
10.1063/1.1808117
10.1063/1.1808117 · External reference
10.1021/ja0432463
10.1021/ja0432463 · External reference
Ion-water interaction potentials derived from free energy perturbation simulations
10.1021/j100384a009 · 1990 · External reference
10.1063/1.470117
10.1063/1.470117 · External reference
Thermodynamics of Hydrogen Bonding in Hydrophilic and Hydrophobic Media
10.1021/jp0572535 · 2006 · External reference
Free energy calculations: a breakthrough for modeling organic chemistry in solution
10.1021/ar00161a004 · 1989 · External reference
The role of computer simulation techniques in protein engineering
1988 · External reference
Assessing the performance of MM/PBSA and MM/GBSA methods. 7. Entropy effects on the performance of end-point binding free energy calculation approaches
2018 · External reference
MMPBSA.py: an efficient program for end-state free energy calculations
10.1021/ct300418h · 2012 · External reference
The Amber biomolecular simulation programs
10.1002/jcc.20290 · 2010 · External reference
RNApdbee 2.0: multifunctional tool for RNA structure annotation
2018 · External reference
A unified dynamic programming framework for the analysis of interacting nucleic acid strands: enhanced models, scalability, and speed
2020 · External reference
10.1002/jcc.21596
10.1002/jcc.21596 · External reference
10.1021/ci9004157
10.1021/ci9004157 · External reference
10.1093/nar/gkz394
10.1093/nar/gkz394 · External reference
FARFAR2: Improved De Novo Rosetta Prediction of Complex Global RNA Folds
10.1016/j.str.2020.05.011 · 2020 · External reference
10.1021/acs.jctc.5b00907
10.1021/acs.jctc.5b00907 · External reference
