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References from Empirical comparison and recent advances of computational prediction of hormone binding proteins using machine learning methods. Local targets link to admitted publications; unresolved targets remain external evidence.
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Insulin-like growth factor (IGF)-binding proteins: interactions with IGFs and intrinsic bioactivities
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The “Pardridge” hypotheses relating to the role of hormone binding proteins in hormone delivery: a critioue
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HBPred: a tool to identify growth hormone-binding proteins
10.7150/ijbs.24174 · 2018 · External reference
10.1016/j.csbj.2021.07.013 · Admitted local publication
Early diagnosis of pancreatic ductal adenocarcinoma by combining relative expression orderings with machine-learning method
10.3389/fcell.2020.582864 · 2020 · External reference
10.1016/j.csbj.2018.10.007 · Admitted local publication
Identification of hormone-binding proteins using a novel ensemble classifier
10.1007/s00607-018-0682-x · 2019 · External reference
Identification of hormone binding proteins based on machine learning method
10.3934/mbe.2019123 · 2019 · External reference
Computational identification of N4-methylcytosine sites in the mouse genome with machine-learning method
10.3934/mbe.2021167 · 2021 · External reference
iHBP-DeepPSSM: identifying hormone binding proteins using PsePSSM based evolutionary features and deep learning approach
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Relief-based feature selection: Introduction and review
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Unresolved reference
2021 · External reference
Prediction of hormone-binding proteins based on K-mer feature representation and naive bayes
10.3389/fgene.2021.797641 · 2021 · External reference
Deep-GHBP: improving prediction of Growth Hormone-binding proteins using deep learning model
10.1016/j.bspc.2022.103856 · 2022 · External reference
Mendelian randomization highlights causal association between genetically increased C-reactive protein levels and reduced Alzheimer's disease risk
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Cognitive performance protects against Alzheimer's disease independently of educational attainment and intelligence
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Integrated biomarker profiling of the metabolome associated with impaired fasting glucose and type 2 diabetes mellitus in large‐scale Chinese patients
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DeepYY1: a deep learning approach to identify YY1-mediated chromatin loops
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ECFS-DEA: an ensemble classifier-based feature selection for differential expression analysis on expression profiles
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Identifying plant pentatricopeptide repeat proteins using a variable selection method
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PseKRAAC: a flexible web server for generating pseudo K-tuple reduced amino acids composition
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10.1016/j.ygeno.2020.08.016
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rs1990622 variant associates with Alzheimer's disease and regulates TMEM106B expression in human brain tissues
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Sequence-based identification of arginine amidation sites in proteins using deep representations of proteins and PseAAC
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Inferring drug-disease associations based on known protein complexes
2015 · External reference
Characterizing viral circRNAs and their application in identifying circRNAs in viruses
10.1093/bib/bbab404 · 2022 · External reference
Prediction of protein folding class using global description of amino acid sequence
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HS-MMGKG: a fast multi-objective harmony search algorithm for two-locus model detection in GWAS
10.2174/1574893614666190409110843 · 2019 · External reference
Identification of potential inhibitors against SARS-Cov-2 using computational drug repurposing study
2021 · External reference
RaacLogo: a new sequence logo generator by using reduced amino acid clusters
10.1093/bib/bbaa096 · 2021 · External reference
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Experimental and molecular evidence of Reptalus panzeri as a natural vector of bois noir
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A review on the recent developments of sequence-based protein feature extraction methods
10.2174/1574893614666181212102749 · 2019 · External reference
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10.1093/database/baz131 · 2019 · External reference
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iCarPS: a computational tool for identifying protein carbonylation sites by novel encoded features
10.1093/bioinformatics/btaa702 · 2021 · External reference
MRMD2.0: a python tool for machine learning with feature ranking and reduction
10.2174/2212392xmta2bmjko1 · 2020 · External reference
iTTCA-RF: a random forest predictor for tumor T cell antigens
10.1186/s12967-021-03084-x · 2021 · External reference
eHSCPr discriminating the cell identity involved in endothelial to hematopoietic transition
10.1093/bioinformatics/btab071 · 2021 · External reference
StackIL6: a stacking ensemble model for improving the prediction of IL-6 inducing peptides
10.1093/bib/bbab172 · 2021 · External reference
NeuroPred-FRL: an interpretable prediction model for identifying neuropeptide using feature representation learning
10.1093/bib/bbab167 · 2021 · External reference
STALLION: a stacking-based ensemble learning framework for prokaryotic lysine acetylation site prediction
10.1093/bib/bbab376 · 2022 · External reference
Screening of prospective plant compounds as H1R and CL1R inhibitors and its antiallergic efficacy through molecular docking approach
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Application and development of artificial intelligence and intelligent disease diagnosis
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Risk prediction of diabetes: big data mining with fusion of multifarious physical examination indicators
10.1016/j.inffus.2021.02.015 · 2021 · External reference
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10.1093/bioinformatics/bty827 · 2019 · External reference
Deep-4mCW2V: a sequence-based predictor to identify N4-methylcytosine sites in Escherichia coli
10.1016/j.ymeth.2021.07.011 · 2022 · External reference
iThermo: a sequence-based model for identifying thermophilic proteins using a multi-feature fusion strategy
10.3389/fmicb.2022.790063 · 2022 · External reference
Prediction of protein-protein interactions in arabidopsis thaliana using partial training samples in a machine learning framework
10.2174/1574893616666210204145254 · 2021 · External reference
RFhy-m2G: identification of RNA N2-methylguanosine modification sites based on random forest and hybrid features
10.1016/j.ymeth.2021.05.016 · 2022 · External reference
A computational platform to identify origins of replication sites in eukaryotes
10.1093/bib/bbaa017 · 2021 · External reference
10.1016/j.csbj.2020.04.015 · Admitted local publication
DHSpred: support-vector-machine-based human DNase I hypersensitive sites prediction using the optimal features selected by random forest
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Comprehensive prediction of lipocalin proteins using artificial intelligence strategy
10.31083/j.fbl2703084 · 2022 · External reference
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10.1093/bib/bbaa202 · 2021 · External reference
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Situation assessment for air combat based on novel semi-supervised naive Bayes
10.21629/jsee.2018.04.11 · 2018 · External reference
sgRNACNN: identifying sgRNA on-target activity in four crops using ensembles of convolutional neural networks
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Review of the applications of deep learning in bioinformatics
10.2174/1574893615999200711165743 · 2020 · External reference
Deep-BSC: predicting raw DNA binding pattern in Arabidopsis thaliana
10.2174/1574893615999200707142852 · 2021 · External reference
iDPPIV-SCM: a sequence-based predictor for identifying and analyzing dipeptidyl peptidase IV (DPP-IV) inhibitory peptides using a scoring card method
10.1021/acs.jproteome.0c00590 · 2020 · External reference
10.1016/j.ijbiomac.2022.11.299
10.1016/j.ijbiomac.2022.11.299 · External reference
iUmami-SCM: a novel sequence-based predictor for prediction and analysis of umami peptides using a scoring card method with propensity scores of dipeptides
10.1021/acs.jcim.0c00707 · 2020 · External reference
iBitter-SCM: identification and characterization of bitter peptides using a scoring card method with propensity scores of dipeptides
10.1016/j.ygeno.2020.03.019 · 2020 · External reference
10.1155/2021/6664362
10.1155/2021/6664362 · External reference
DeepIPs: comprehensive assessment and computational identification of phosphorylation sites of SARS-CoV-2 infection using a deep learning-based approach
10.1093/bib/bbab244 · 2021 · External reference
Application of artificial intelligence and machine learning for COVID-19 drug discovery and vaccine design
10.1093/bib/bbab320 · 2021 · External reference
Predicting protein phosphorylation sites based on deep learning
10.2174/1574893614666190902154332 · 2020 · External reference
10.1016/j.ygeno.2020.08.016
10.1016/j.ygeno.2020.08.016 · External reference
Identifying antioxidant proteins by using amino acid composition and protein-protein interactions
10.3389/fcell.2020.591487 · 2020 · External reference
Discrimination of thermophilic proteins and non-thermophilic proteins using feature dimension reduction
10.3389/fbioe.2020.584807 · 2020 · External reference
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10.1093/bib/bbab335
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10.3390/curroncol29080427
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Computational prediction of species-specific yeast DNA replication origin via iterative feature representation
10.1093/bib/bbaa304 · 2021 · External reference
10.1093/bioinformatics/btaa160
10.1093/bioinformatics/btaa160 · External reference
i6mA-Fuse: improved and robust prediction of DNA 6 mA sites in the Rosaceae genome by fusing multiple feature representation
10.1007/s11103-020-00988-y · 2020 · External reference
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Deep-4mCGP: a deep learning approach to predict 4mC sites in Geobacter pickeringii by using correlation-based feature selection technique
10.3390/ijms23031251 · 2022 · External reference
A sequence-based deep learning approach to predict CTCF-mediated chromatin loop
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