Contact and support
Need help, have a question, or want to contact the ResearchHub team?
© 2026 ResearchHub. Built for responsible scholarly connection.
Privacy-aware community infrastructureResearch graph
References from Deciphering plant cell–cell communications using single-cell omics data. Local targets link to admitted publications; unresolved targets remain external evidence.
Enhancing our understanding of plant cell-to-cell interactions using single-cell omics
10.3389/fpls.2021.696811 · 2021 · External reference
10.1105/tpc.111.082982
10.1105/tpc.111.082982 · External reference
Microfluidic single-cell manipulation and analysis: methods and applications
2019 · External reference
10.1038/nature08977
10.1038/nature08977 · External reference
10.1016/j.cell.2010.10.020
10.1016/j.cell.2010.10.020 · External reference
10.1242/dev.048199
10.1242/dev.048199 · External reference
RNA sequencing profiles the developmental landscape of arabidopsis root
10.1016/j.molp.2019.04.004 · 2019 · External reference
10.1104/pp.18.01482
10.1104/pp.18.01482 · External reference
Dynamics of gene expression in single root cells of Arabidopsis thaliana
10.1105/tpc.18.00785 · 2019 · External reference
10.1016/j.devcel.2019.02.022
10.1016/j.devcel.2019.02.022 · External reference
10.1093/plcell/koab101
10.1093/plcell/koab101 · External reference
10.1016/j.devcel.2019.02.022
10.1016/j.devcel.2019.02.022 · External reference
10.1016/j.devcel.2022.01.008
10.1016/j.devcel.2022.01.008 · External reference
10.1016/j.molp.2020.12.014
10.1016/j.molp.2020.12.014 · External reference
10.1016/j.molp.2021.05.028
10.1016/j.molp.2021.05.028 · External reference
10.1016/j.molp.2020.06.010
10.1016/j.molp.2020.06.010 · External reference
10.1093/plcell/koaa060
10.1093/plcell/koaa060 · External reference
10.1093/plphys/kiab489
10.1093/plphys/kiab489 · External reference
10.1093/plcell/koaa055
10.1093/plcell/koaa055 · External reference
10.1016/j.devcel.2021.03.014
10.1016/j.devcel.2021.03.014 · External reference
10.1093/plcell/koac167
10.1093/plcell/koac167 · External reference
The maize single-nucleus transcriptome comprehensively describes signaling networks governing movement and development of grass stomata
2022 · External reference
Single-nucleus transcriptomics for an integrative view of grass stomatal processes
10.1093/plcell/koac054 · 2022 · External reference
Transcriptional landscape of highly lignified poplar stems at single-cell resolution
10.1186/s13059-021-02537-2 · 2021 · External reference
10.1016/j.devcel.2021.02.021
10.1016/j.devcel.2021.02.021 · External reference
10.1073/pnas.2018788117
10.1073/pnas.2018788117 · External reference
Single-nucleus RNA-seq resolves spatiotemporal developmental trajectories in the tomato shoot apex
2020 · External reference
Single-nuclei transcriptome analysis of the shoot apex vascular system differentiation in Populus
2022 · External reference
10.1016/j.devcel.2020.12.015
10.1016/j.devcel.2020.12.015 · External reference
10.1016/j.jgg.2021.06.001
10.1016/j.jgg.2021.06.001 · External reference
10.1038/s41477-021-00922-0
10.1038/s41477-021-00922-0 · External reference
10.1111/jipb.13159
10.1111/jipb.13159 · External reference
10.1111/nph.17992
10.1111/nph.17992 · External reference
A 3D gene expression atlas of the floral meristem based on spatial reconstruction of single nucleus RNA sequencing data
10.1038/s41467-022-30177-y · 2022 · External reference
10.1111/nph.18008
10.1111/nph.18008 · External reference
10.1016/j.jgg.2021.06.001
10.1016/j.jgg.2021.06.001 · External reference
10.1016/j.celrep.2019.04.054
10.1016/j.celrep.2019.04.054 · External reference
10.1038/s41587-020-0739-1
10.1038/s41587-020-0739-1 · External reference
10.1016/j.cell.2020.10.026
10.1016/j.cell.2020.10.026 · External reference
Seamless integration of image and molecular analysis for spatial transcriptomics workflows
10.1186/s12864-020-06832-3 · 2020 · External reference
10.1016/j.devcel.2022.04.011
10.1016/j.devcel.2022.04.011 · External reference
PlantPhoneDB: a manually curated pan-plant database of ligand-receptor pairs infers cell-cell communication
2022 · External reference
10.1007/s13238-020-00727-5
10.1007/s13238-020-00727-5 · External reference
10.1093/nar/gkab949
10.1093/nar/gkab949 · External reference
Exploring additional valuable information from single-cell RNA-seq data
10.3389/fcell.2020.593007 · 2020 · External reference
Uncovering hypergraphs of cell-cell interaction from single cell RNA-sequencing data
2019 · External reference
InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic
10.1093/nar/gku1203 · 2015 · External reference
10.1038/s41467-022-30755-0
10.1038/s41467-022-30755-0 · External reference
10.1038/s41576-020-00292-x
10.1038/s41576-020-00292-x · External reference
10.1093/nar/gkz204
10.1093/nar/gkz204 · External reference
iTALK: an R Package to characterize and illustrate intercellular communication
2019 · External reference
10.1016/j.celrep.2019.01.063
10.1016/j.celrep.2019.01.063 · External reference
10.1038/s41596-020-0292-x
10.1038/s41596-020-0292-x · External reference
10.1038/s41467-021-21246-9
10.1038/s41467-021-21246-9 · External reference
Dissection of intercellular communication using the transcriptome-based framework ICELLNET
10.1038/s41467-021-21244-x · 2021 · External reference
CellTalkDB: a manually curated database of ligand-receptor interactions in humans and mice
10.1093/bib/bbaa269 · 2021 · External reference
Cellinker: a platform of ligand-receptor interactions for intercellular communication analysis
2021 · External reference
10.1093/nar/gkab638
10.1093/nar/gkab638 · External reference
10.1038/s41467-020-18873-z
10.1038/s41467-020-18873-z · External reference
10.1093/nar/gkaa183
10.1093/nar/gkaa183 · External reference
10.1038/s41592-019-0667-5
10.1038/s41592-019-0667-5 · External reference
10.1016/j.celrep.2015.01.040
10.1016/j.celrep.2015.01.040 · External reference
10.1038/s41467-020-15968-5
10.1038/s41467-020-15968-5 · External reference
10.1038/s41422-020-0353-2
10.1038/s41422-020-0353-2 · External reference
10.1038/s41586-019-1773-3
10.1038/s41586-019-1773-3 · External reference
Inferring a spatial code of cell-cell interactions across a whole animal bodys
2021 · External reference
10.1186/s13059-021-02286-2
10.1186/s13059-021-02286-2 · External reference
10.1186/s13059-022-02663-5
10.1186/s13059-022-02663-5 · External reference
stLearn: integrating spatial location, tissue morphology and gene expression to find cell types, cell-cell interactions and spatial trajectories within undissociated tissues
2020 · External reference
10.1016/j.celrep.2019.08.077
10.1016/j.celrep.2019.08.077 · External reference
De novo reconstruction of cell interaction landscapes from single-cell spatial transcriptome data with DeepLinc
10.1186/s13059-022-02692-0 · 2022 · External reference
10.1111/pbi.13656
10.1111/pbi.13656 · External reference
10.1093/nar/gkac773
10.1093/nar/gkac773 · External reference
10.1038/s41587-019-0071-9
10.1038/s41587-019-0071-9 · External reference
10.1038/ncomms8866
10.1038/ncomms8866 · External reference
