Research graph
References from Thousands of oscillating LncRNAs in the mouse testis. Local targets link to admitted publications; unresolved targets remain external evidence.
Life’s 24-hour clock: molecular control of circadian rhythms in animal cells
10.1016/s0968-0004(00)01695-9 · 2000 · External reference
10.1016/b978-0-12-809265-1.00005-8
10.1016/b978-0-12-809265-1.00005-8 · External reference
Biological clocks
10.1073/pnas.96.16.8819 · 1999 · External reference
10.1038/s41575-020-00401-5
10.1038/s41575-020-00401-5 · External reference
Circadian clock, cancer, and chemotherapy
10.1021/bi5007354 · 2015 · External reference
Biological clock and inflammatory bowel disease review: from the standpoint of the intestinal barrier
2022 · External reference
Model and non-model insects in chronobiology
10.3389/fnbeh.2020.601676 · 2020 · External reference
Functional development of the circadian clock in the zebrafish pineal gland
10.1155/2014/235781 · 2014 · External reference
10.3390/ijms22157810
10.3390/ijms22157810 · External reference
10.1007/978-81-322-3688-7_8
10.1007/978-81-322-3688-7_8 · External reference
Unresolved reference
External reference
Studying circadian rhythms in Drosophila melanogaster
10.1016/j.ymeth.2014.01.001 · 2014 · External reference
The circadian clock regulates autophagy directly through the nuclear hormone receptor Nr1d1/Reverbα and indirectly via Cebpb/(C/ebpβ) in zebrafish
10.1080/15548627.2016.1183843 · 2016 · External reference
10.1523/jneurosci.2551-14.2015
10.1523/jneurosci.2551-14.2015 · External reference
10.1074/jbc.m114.605022
10.1074/jbc.m114.605022 · External reference
Circadian regulation of apolipoprotein gene expression affects testosterone production in mouse testis
2021 · External reference
10.1210/me.2002-0184
10.1210/me.2002-0184 · External reference
10.1177/0748730415618297
10.1177/0748730415618297 · External reference
10.1177/0748730404274078
10.1177/0748730404274078 · External reference
10.1126/science.1112014
10.1126/science.1112014 · External reference
LncRNA functions as a new emerging epigenetic factor in determining the fate of stem cells
2020 · External reference
10.1016/j.febslet.2015.01.013
10.1016/j.febslet.2015.01.013 · External reference
10.1016/j.neo.2014.11.004
10.1016/j.neo.2014.11.004 · External reference
10.1093/nar/gkx156
10.1093/nar/gkx156 · External reference
In vivo functional analysis of non-conserved human lncRNAs associated with cardiometabolic traits
10.1038/s41467-019-13688-z · 2020 · External reference
Hundreds of LncRNAs display circadian rhythmicity in zebrafish larvae
2021 · External reference
A micropeptide encoded by lncRNA MIR155HG suppresses autoimmune inflammation via modulating antigen presentation
2020 · External reference
A novel mitochondrial micropeptide MPM enhances mitochondrial respiratory activity and promotes myogenic differentiation
2019 · External reference
10.1371/journal.pgen.1007764
10.1371/journal.pgen.1007764 · External reference
LncRNA-encoded peptide: functions and predicting methods
10.3389/fonc.2020.622294 · 2021 · External reference
10.3390/biology10050371
10.3390/biology10050371 · External reference
10.1016/j.cell.2015.01.009
10.1016/j.cell.2015.01.009 · External reference
Prediction of LncRNA-encoded small peptides in glioma and oligomer channel functional analysis using in silico approaches
10.1371/journal.pone.0248634 · 2021 · External reference
A small protein encoded by a putative lncRNA regulates apoptosis and tumorigenicity in human colorectal cancer cells
2020 · External reference
Critical roles of long noncoding RNAs in Drosophila spermatogenesis
10.1101/gr.199547.115 · 2016 · External reference
A testis-specific long non-coding RNA, lncRNA-Tcam1, regulates immune-related genes in mouse male germ cells
2017 · External reference
Kastor and Polluks polypeptides encoded by a single gene locus cooperatively regulate VDAC and spermatogenesis
10.1038/s41467-022-28677-y · 2022 · External reference
1700108J01Rik and 1700101O22Rik are mouse testis-specific long non-coding RNAs
10.1007/s00418-018-1642-4 · 2018 · External reference
MetaCycle: an integrated r package to evaluate periodicity in large scale data
10.1093/bioinformatics/btw405 · 2016 · External reference
Adverse effects of circadian desynchrony on the male reproductive system: an epidemiological and experimental study
10.1093/humrep/deaa101 · 2020 · External reference
Graph-Based Genome Alignment and Genotyping with HISAT2 and HISAT-genotype
10.1038/s41587-019-0201-4 · 2019 · External reference
High-throughput functional annotation and data mining with the Blast2GO suite
2008 · External reference
Strengths and Limitations of Period Estimation Methods for Circadian Data
10.1371/journal.pone.0096462 · 2014 · External reference
The role of cis-regulatory motifs and genetical control of expression in the divergence of yeast duplicate genes
10.1093/molbev/msm188 · 2007 · External reference
10.1534/genetics.115.176172
10.1534/genetics.115.176172 · External reference
Molecular Interactions between Pathogens and the Circadian Clock
10.3390/ijms20235824 · 2019 · External reference
10.1007/978-1-4419-9758-6
10.1007/978-1-4419-9758-6 · External reference
10.1146/annurev-genet-102209-163432
10.1146/annurev-genet-102209-163432 · External reference
10.1093/bioinformatics/btn654
10.1093/bioinformatics/btn654 · External reference
10.1093/bioinformatics/btr064
10.1093/bioinformatics/btr064 · External reference
JASPAR 2020: update of the open-access database of transcription factor binding profiles
2019 · External reference
10.1038/75556
10.1038/75556 · External reference
10.1101/gr.1239303
10.1101/gr.1239303 · External reference
Principal component analysis
10.1038/nmeth.4346 · 2017 · External reference
NONCODEV6: an updated database dedicated to long non-coding RNA annotation in both animals and plants
2021 · External reference
The vienna RNA websuite
2008 · External reference
CPAT: coding-potential assessment tool using an alignment-free logistic regression model
2013 · External reference
ExPASy: the proteomics server for in-depth protein knowledge and analysis
10.1093/nar/gkg563 · 2003 · External reference
PS)2: protein structure prediction server
10.1093/nar/gkl187 · 2006 · External reference
PS)2-v2: template-based protein structure prediction server
2009 · External reference
LimoRhyde: a flexible approach for differential analysis of rhythmic transcriptome data
10.1177/0748730418813785 · 2019 · External reference
Major impact of sampling methodology on gene expression in estrogen receptor–positive breast cancer
2018 · External reference
Fasting and sampling time affect liver gene expression of high-fat diet-fed mice
10.1017/s1751731109991583 · 2010 · External reference
Emerging role of long noncoding RNA-encoded micropeptides in cancer
2020 · External reference
Circadian changes in long noncoding RNAs in the pineal gland
10.1073/pnas.1207748109 · 2012 · External reference
10.1038/nrg2934
10.1038/nrg2934 · External reference
Poly(A)-seq: A method for direct sequencing and analysis of the transcriptomic poly(A)-tails
2020 · External reference
