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References from Microbiota profiling in esophageal diseases: Novel insights into molecular staining and clinical outcomes. Local targets link to admitted publications; unresolved targets remain external evidence.
The gut flora as a forgotten organ
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The microflora of the oesophagus
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Novel device to sample the esophageal microbiome--the esophageal string test
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A multi-omic analysis reveals the esophageal dysbiosis as the predominant trait of eosinophilic esophagitis
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Esophageal microbiome in healthy children and esophageal eosinophilia
10.1097/mpg.0000000000003413 · 2022 · External reference
Microbiome in eosinophilic esophagitis-metagenomic, metatranscriptomic, and metabolomic changes: a systematic review
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Evaluation of 16S rRNA gene sequencing for species and strain-level microbiome analysis
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Impact of DNA sequencing and analysis methods on 16S rRNA gene bacterial community analysis of dairy products
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Metaproteomics study of the gut microbiome
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Use of metatranscriptomics in microbiome research
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Multiomics technologies: role in disease biomarker discoveries and therapeutics
10.1093/bfgp/elac017 · 2023 · External reference
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Batch effect detection and correction in RNA-seq data using machine-learning-based automated assessment of quality
10.1186/s12859-022-04775-y · 2022 · External reference
The changing epidemiology of gastroesophageal reflux disease: are patients getting younger?
10.5056/jnm18140 · 2018 · External reference
Systematic review: the burden of disruptive gastro-oesophageal reflux disease on health-related quality of life
10.1111/j.1365-2036.2012.05086.x · 2012 · External reference
Reflux, Barrett’s oesophagus and adenocarcinoma: burning questions
10.1038/nrc1166 · 2003 · External reference
10.1136/gutjnl-2012-304269
10.1136/gutjnl-2012-304269 · External reference
Role of saliva in esophageal defense: implications in patients with nonerosive reflux disease
10.1097/maj.0000000000000443 · 2015 · External reference
10.3748/wjg.v27.i18.2054
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Recent advances in lipopolysaccharide recognition systems
10.3390/ijms21020379 · 2020 · External reference
Non-erosive reflux disease (NERD), symptomatic and asymptomatic erosive reflux disease (ERD): from hypersensitive to hyposensitive esophagus
10.1007/s10620-010-1275-5 · 2011 · External reference
Distinct microbiota dysbiosis in patients with non-erosive reflux disease and esophageal adenocarcinoma
10.3390/jcm9072162 · 2020 · External reference
Unresolved reference
External reference
Gastroesophageal reflux might cause esophagitis through a cytokine-mediated mechanism rather than caustic acid injury
10.1053/j.gastro.2009.07.055 · 2009 · External reference
Association of acute gastroesophageal reflux disease with esophageal histologic changes
10.1001/jama.2016.5657 · 2016 · External reference
10.5056/jnm.2010.16.4.374
10.5056/jnm.2010.16.4.374 · External reference
Endotoxin signal transduction in macrophages
10.1002/jlb.60.1.8 · 1996 · External reference
The esophageal microbiome in health and disease
10.1007/s11894-018-0642-9 · 2018 · External reference
Microbiology of dental plaque biofilms and their role in oral health and caries
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10.1053/j.gastro.2019.04.013
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10.1371/journal.pone.0231789
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Preliminary esophageal microbiome studies prompt important scientific questions
10.1038/s41424-018-0029-0 · 2018 · External reference
Composition of the adult digestive tract bacterial microbiome based on seven mouth surfaces, tonsils, throat and stool samples
10.1186/gb-2012-13-6-r42 · 2012 · External reference
Diagnosis of GERD in typical and atypical manifestations
2018 · External reference
Prolonged treatment duration is required for successful Helicobacter pylori eradication with proton pump inhibitor triple therapy in Canada
10.1155/2013/801915 · 2013 · External reference
Curing Helicobacter pylori infection in patients with duodenal ulcer may provoke reflux esophagitis
10.1016/s0016-5085(97)70024-6 · 1997 · External reference
Helicobacter pylori and symptomatic relapse of gastro-oesophageal reflux disease: a randomised controlled trial
10.1016/s0140-6736(00)04894-7 · 2001 · External reference
Helicobacter pylori and nonmalignant diseases
10.1111/hel.12253 · 2015 · External reference
JC Virus, Helicobacter pylori, and oesophageal achalasia: preliminary results from a retrospective case-control study
10.1007/s10620-012-2485-9 · 2013 · External reference
Colonic fermentation influences lower esophageal sphincter function in gastroesophageal reflux disease
10.1053/gast.2003.50159 · 2003 · External reference
Colonic fermentation and proximal gastric tone in humans
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Esophageal achalasia: current diagnosis and treatment
10.1080/17474124.2018.1481748 · 2018 · External reference
Achalasia: virus-induced euthanasia of neurons?
10.1111/j.1572-0241.2008.01967.x · 2008 · External reference
Varicella-zoster virus DNA in the oesophageal myenteric plexus in achalasia
10.1136/gut.34.3.299 · 1993 · External reference
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Identification of human herpes virus 1 encoded microRNAs in biopsy samples of lower esophageal sphincter muscle during peroral endoscopic myotomy for esophageal achalasia
10.1111/den.13491 · 2020 · External reference
Association of achalasia with active varicella zoster virus infection of the esophagus
10.1053/j.gastro.2021.04.057 · 2021 · External reference
Varicella virus in achalasia
10.1016/0016-5085(93)90978-l · 1993 · External reference
Is the Sars-CoV-2 virus a possible trigger agent for the development of achalasia?
10.1111/nmo.14502 · 2023 · External reference
Post-COVID-19 Achalasia?
10.1007/s10620-022-07752-w · 2023 · External reference
Achalasia: the current clinical dilemma and possible pathogenesis
10.5056/jnm22176 · 2023 · External reference
10.15171/mejdd.2018.106
10.15171/mejdd.2018.106 · External reference
Megaesophagus microbiota: a qualitative and quantitative analysis
10.1016/s1091-255x(02)00028-8 · 2002 · External reference
10.5056/jnm21057
10.5056/jnm21057 · External reference
Characteristics of the esophageal microbiome in patients with achalasia and its changes before and after peroral endoscopic myotomy: A pilot study
2023 · External reference
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10.1038/ajg.2014.12 · External reference
Exploring esophageal microbiomes in esophageal diseases: a systematic review
10.5056/jnm19240 · 2020 · External reference
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10.1056/nejmra1502863 · External reference
10.1016/j.jaci.2018.02.006
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Toll-like receptors-mediated pathways activate inflammatory responses in the esophageal mucosa of adult eosinophilic esophagitis
10.1038/s41424-018-0017-4 · 2018 · External reference
10.1097/mpg.0000000000002817
10.1097/mpg.0000000000002817 · External reference
Pollen and eosinophilic esophagitis
10.1016/s0091-6749(03)01715-9 · 2003 · External reference
Genetic dissection of eosinophilic esophagitis provides insight into disease pathogenesis and treatment strategies
10.1016/j.jaci.2011.03.046 · 2011 · External reference
Inverse association of esophageal eosinophilia with Helicobacter pylori based on analysis of a US pathology database
10.1053/j.gastro.2011.06.081 · 2011 · External reference
Case-control study of association of eosinophilic gastrointestinal disorders with Helicobacter pylori infection in Japan
10.3164/jcbn.13-15 · 2013 · External reference
Dietary treatment modulates mast cell phenotype, density, and activity in adult eosinophilic oesophagitis
10.1111/cea.12504 · 2016 · External reference
Eosinophilic esophagitis and microbiota: state of the art
10.3389/fimmu.2021.595762 · 2021 · External reference
10.1186/s40168-015-0085-6
10.1186/s40168-015-0085-6 · External reference
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10.1371/journal.pone.0128346 · External reference
The salivary microbiome is altered in children with eosinophilic esophagitis and correlates with disease activity
10.14309/ctg.0000000000000039 · 2019 · External reference
The microbiota in eosinophilic esophagitis: a systematic review
10.1111/jgh.15921 · 2022 · External reference
Esophageal microbiome in active eosinophilic esophagitis and changes induced by different therapies
10.1038/s41598-021-86464-z · 2021 · External reference
Measures of precision for dissimilarity-based multivariate analysis of ecological communities
10.1111/ele.12385 · 2015 · External reference
A systematic comparison between infant formula compositions using the Bray-Curtis similarity index
2020 · External reference
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10.1111/apt.17091 · External reference
Topic evolution analysis for omics data integration in cancers
10.3389/fcell.2021.631011 · 2021 · External reference
Early outcomes from the Dutch upper gastrointestinal cancer audit
10.1002/bjs.10303 · 2016 · External reference
Morbidity, mortality, cost, and survival estimates of gastrointestinal anastomotic leaks
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Hospital costs of complications after esophagectomy for cancer
10.1016/j.ejso.2016.11.013 · 2017 · External reference
A propensity score matched analysis of open versus minimally invasive transthoracic esophagectomy in the netherlands
10.1097/sla.0000000000002393 · 2017 · External reference
Predictors of anastomotic leak after esophagectomy: an analysis of the society of thoracic surgeons general thoracic database
10.1016/j.athoracsur.2013.07.119 · 2013 · External reference
A large anastomotic leakage after esophageal surgery treated with endoluminal vacuum-assisted closure: a case report
10.1093/jscr/rjaa071 · 2020 · External reference
Endoscopic vacuum therapy (EVT) versus self-expandable metal stent (SEMS) for anastomotic leaks after upper gastrointestinal surgery: systematic review and meta-analysis
10.3390/life13020287 · 2023 · External reference
Endoscopic vacuum therapy versus self-expandable metal stent for treatment of anastomotic leaks < 30 mm following oncologic Ivor-Lewis esophagectomy: a matched case-control study
10.1007/s00464-023-10213-8 · 2023 · External reference
Double layer stent for the treatment of leaks and fistula after upper gastrointestinal oncologic surgery: a retrospective study
10.1007/s13304-021-01155-8 · 2022 · External reference
Endoscopic vacuum therapy in the treatment of postesophagectomy leaks: is intracavitary the way?
10.1016/j.gie.2022.05.014 · 2022 · External reference
The prophylactic use of endoscopic vacuum therapy for anastomotic dehiscence after rectal anterior resection: is it feasible for redo surgery?
10.1007/s10151-021-02566-w · 2022 · External reference
Endoluminal vacuum therapy (E-Vac): a treatment option in oesophagogastric surgery
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Increased variance in oral and gastric microbiome correlates with esophagectomy anastomotic leak
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Risk factors for delayed gastric emptying after esophagectomy
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Delayed gastric emptying after esophagectomy: management and prevention
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Gastroparesis: the complex interplay with microbiota and the role of exogenous infections in the pathogenesis of the disease
10.3390/microorganisms11051122 · 2023 · External reference
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Upper gastrointestinal microbiota and digestive diseases
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Esophageal food impaction and eosinophilic esophagitis: a retrospective study, systematic review, and meta-analysis
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Intratumoural microbiota: from theory to clinical application
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