Research graph
References from Cat-E: A comprehensive web tool for exploring cancer targeting strategies. Local targets link to admitted publications; unresolved targets remain external evidence.
Unresolved reference
External reference
Tsvdb: A web-tool for tcga splicing variants analysis
2018 · External reference
10.1093/nar/gkz430
10.1093/nar/gkz430 · External reference
Integrative analysis of complex cancer genomics and clinical profiles using the cbioportal
2013 · External reference
Genavi: A shiny web application for gene expression normalization, analysis and visualization
2019 · External reference
10.1093/bioinformatics/btz931
10.1093/bioinformatics/btz931 · External reference
10.1016/j.csbj.2023.04.023 · Admitted local publication
GEOexplorer: a webserver for gene expression analysis and visualization
10.1093/nar/gkac364 · 2022 · External reference
Cancer3D: understanding cancer mutations through protein structures
10.1093/nar/gku1140 · 2015 · External reference
Intogen-mutations identifies cancer drivers across tumor types
2013 · External reference
10.1093/bioinformatics/btac003
10.1093/bioinformatics/btac003 · External reference
10.1093/nar/gkac427
10.1093/nar/gkac427 · External reference
Emt, stemness, and drug resistance in biological context: A 3d tumor tissue/in silico platform for analysis of combinatorial treatment in nsclc with aggressive kras-biomarker signatures
2022 · External reference
Ovirustdb: A database of oncolytic viruses for the advancement of therapeutics in cancer
10.1016/j.virol.2020.05.016 · 2020 · External reference
Viruses. string: a virus-host protein-protein interaction database
2018 · External reference
The intact molecular interaction database in 2012
10.1093/nar/gkr1088 · 2012 · External reference
10.1093/nar/gky1079
10.1093/nar/gky1079 · External reference
10.1093/nar/gkv1507
10.1093/nar/gkv1507 · External reference
10.1093/nar/gkac947
10.1093/nar/gkac947 · External reference
rPanglaoDB: an R package to download and merge labeled single-cell RNA-seq data from the PanglaoDB database
10.1093/bioinformatics/btab549 · 2022 · External reference
10.1093/nar/gkx1037
10.1093/nar/gkx1037 · External reference
10.1093/nar/gky1033
10.1093/nar/gky1033 · External reference
10.1093/nar/gkv1165
10.1093/nar/gkv1165 · External reference
STITCH: interaction networks of chemicals and proteins
10.1093/nar/gkm795 · 2007 · External reference
10.1056/nejmsa1012065
10.1056/nejmsa1012065 · External reference
Checkpoint therapeutic target database (ckttd): The first comprehensive database for checkpoint targets and their modulators in cancer immunotherapy
2020 · External reference
10.1093/nar/gkv007
10.1093/nar/gkv007 · External reference
10.1093/bioinformatics/btp616
10.1093/bioinformatics/btp616 · External reference
10.1038/nprot.2009.97
10.1038/nprot.2009.97 · External reference
10.1093/bioinformatics/btm254
10.1093/bioinformatics/btm254 · External reference
10.1093/bioinformatics/btab828
10.1093/bioinformatics/btab828 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
10.1186/1752-0509-7-74
10.1186/1752-0509-7-74 · External reference
Gene set enrichment analysis with topGO
2009 · External reference
clusterprofiler 4.0: A universal enrichment tool for interpreting omics data
2021 · External reference
10.1093/bioinformatics/btt285
10.1093/bioinformatics/btt285 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Unresolved reference
External reference
Interactive web-based data visualization with r, plotly, and shiny (carson sievert)
10.1111/biom.13474 · 2021 · External reference
10.1111/j.1541-0420.2011.01616.x
10.1111/j.1541-0420.2011.01616.x · External reference
Immune cell gene signatures for profiling the microenvironment of solid tumors
2018 · External reference
10.1016/j.gene.2012.11.028
10.1016/j.gene.2012.11.028 · External reference
10.1101/gr.239244.118
10.1101/gr.239244.118 · External reference
10.1093/bioinformatics/btz631
10.1093/bioinformatics/btz631 · External reference
Jimena: Efficient computing and system state identification for genetic regulatory networks
2013 · External reference
Unresolved reference
External reference
10.1038/s41586-021-03819-2
10.1038/s41586-021-03819-2 · External reference
Alphafold protein structure database: massively expanding the structural coverage of protein-sequence space with high-accuracy models. academicoupcomM Varadi
2022 · External reference
10.32614/cran.package.nglviewer
10.32614/cran.package.nglviewer · External reference
3dmol.js: molecular visualization with webgl
10.1093/bioinformatics/btu829 · 2015 · External reference
10.1016/j.bbcan.2019.05.006
10.1016/j.bbcan.2019.05.006 · External reference
Software jimenae allows efficient dynamic simulations of boolean networks, centrality and system state analysis
2023 · External reference
Connecting cancer pathways to tumor engines: A stratification tool for colorectal cancer combining human in vitro tissue models with boolean in silico models
10.3390/cancers12010028 · 2019 · External reference
10.1002/1878-0261.12323
10.1002/1878-0261.12323 · External reference
Gnosis: an r shiny app supporting cancer genomics survival analysis with cbioportal
2022 · External reference
Hpvtimer: A shiny web application for tumor immune estimation in human papillomavirus-associated cancers
10.1002/imt2.130 · 2023 · External reference
10.3390/ph14101053
10.3390/ph14101053 · External reference
