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References from TFTG: A comprehensive database for human transcription factors and their targets. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nrg2538
10.1038/nrg2538 · External reference
E2F transcription factors control the roller coaster ride of cell cycle gene expression
10.1007/978-1-4939-2957-3_4 · 2016 · External reference
10.1016/j.molcel.2021.11.007
10.1016/j.molcel.2021.11.007 · External reference
TcoF-DB v2: update of the database of human and mouse transcription co-factors and transcription factor interactions
10.1093/nar/gkw1007 · 2017 · External reference
TF-marker: a comprehensive manually curated database for transcription factors and related markers in specific cell and tissue types in human
2022 · External reference
10.1016/j.cell.2018.01.029
10.1016/j.cell.2018.01.029 · External reference
10.1016/j.biochi.2021.10.016
10.1016/j.biochi.2021.10.016 · External reference
Target analysis by integration of transcriptome and ChIP-seq data with BETA
10.1038/nprot.2013.150 · 2013 · External reference
FIMO: scanning for occurrences of a given motif
10.1093/bioinformatics/btr064 · 2011 · External reference
10.1101/gr.098921.109
10.1101/gr.098921.109 · External reference
Regulatory roles of Oct proteins in the mammary gland
10.1016/j.bbagrm.2016.03.015 · 2016 · External reference
10.1016/j.biocel.2008.08.029
10.1016/j.biocel.2008.08.029 · External reference
PAX 8 activates the enhancer of the human thyroperoxidase gene
10.1042/bj3310037 · 1998 · External reference
10.1016/j.cell.2013.09.053
10.1016/j.cell.2013.09.053 · External reference
10.1038/s41422-019-0259-z
10.1038/s41422-019-0259-z · External reference
10.1093/nar/gky1094
10.1093/nar/gky1094 · External reference
hTFtarget: a comprehensive database for regulations of human transcription factors and their targets
10.1016/j.gpb.2019.09.006 · 2020 · External reference
10.1093/nar/gkz881
10.1093/nar/gkz881 · External reference
TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions
10.1093/nar/gkx1013 · 2018 · External reference
MotifMap: integrative genome-wide maps of regulatory motif sites for model species
10.1186/1471-2105-12-495 · 2011 · External reference
10.1093/nar/gky822
10.1093/nar/gky822 · External reference
10.1038/nature11247
10.1038/nature11247 · External reference
ReMap 2020: a database of regulatory regions from an integrative analysis of Human and Arabidopsis DNA-binding sequencing experiments
2020 · External reference
ChIP-Atlas: a data-mining suite powered by full integration of public ChIP-seq data
2018 · External reference
GTRD: a database on gene transcription regulation-2019 update
10.1093/nar/gky1128 · 2019 · External reference
10.1093/nar/gky1095
10.1093/nar/gky1095 · External reference
NCBI GEO: archive for functional genomics data sets--update
10.1093/nar/gks1193 · 2013 · External reference
TRANSFAC and its module TRANSCompel: transcriptional gene regulation in eukaryotes
10.1093/nar/gkj143 · 2006 · External reference
MEME SUITE: tools for motif discovery and searching
10.1093/nar/gkp335 · 2009 · External reference
10.1101/gr.197590.115
10.1101/gr.197590.115 · External reference
JASPAR 2020: update of the open-access database of transcription factor binding profiles
2020 · External reference
10.1016/j.cell.2012.12.009
10.1016/j.cell.2012.12.009 · External reference
Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences
10.1016/j.cell.2008.05.024 · 2008 · External reference
10.1093/nar/gkq992
10.1093/nar/gkq992 · External reference
10.1038/emboj.2010.106
10.1038/emboj.2010.106 · External reference
10.1093/nar/gkac1071
10.1093/nar/gkac1071 · External reference
EnhancerAtlas 2.0: an updated resource with enhancer annotation in 586 tissue/cell types across nine species
2020 · External reference
10.1038/nbt.3947
10.1038/nbt.3947 · External reference
10.1093/nar/gky864
10.1093/nar/gky864 · External reference
EnhancerDB: a resource of transcriptional regulation in the context of enhancers
2019 · External reference
DENdb: database of integrated human enhancers
2015 · External reference
10.1093/nar/gky1025
10.1093/nar/gky1025 · External reference
ENdb: a manually curated database of experimentally supported enhancers for human and mouse
2020 · External reference
10.1038/nbt1010-1045
10.1038/nbt1010-1045 · External reference
The sequence read archive: explosive growth of sequencing data
10.1093/nar/gkr854 · 2012 · External reference
10.1186/gb-2008-9-9-r137
10.1186/gb-2008-9-9-r137 · External reference
10.1016/j.cell.2013.03.036
10.1016/j.cell.2013.03.036 · External reference
10.1186/gb-2009-10-3-r25
10.1186/gb-2009-10-3-r25 · External reference
10.1093/nar/gkv1243
10.1093/nar/gkv1243 · External reference
10.1093/nar/gkv1002
10.1093/nar/gkv1002 · External reference
SilencerDB: a comprehensive database of silencers
10.1093/nar/gkaa839 · 2021 · External reference
10.1093/nar/gkaa943
10.1093/nar/gkaa943 · External reference
10.1038/nmeth.1923
10.1038/nmeth.1923 · External reference
10.1093/bioinformatics/btq033
10.1093/bioinformatics/btq033 · External reference
The chromatin accessibility landscape of primary human cancers
10.1126/science.aav1898 · 2018 · External reference
10.1038/nature11003
10.1038/nature11003 · External reference
10.1038/ng.2653
10.1038/ng.2653 · External reference
The genetic association database
10.1038/ng0504-431 · 2004 · External reference
The DisGeNET knowledge platform for disease genomics: 2019 update
2020 · External reference
KEGG as a reference resource for gene and protein annotation
10.1093/nar/gkv1070 · 2016 · External reference
Pathway commons, a web resource for biological pathway data
10.1093/nar/gkq1039 · 2011 · External reference
The reactome pathway knowledgebase
2020 · External reference
10.1016/j.cell.2011.02.013
10.1016/j.cell.2011.02.013 · External reference
The Gene Ontology project in 2008
10.1093/nar/gkm883 · 2008 · External reference
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
10.1093/bioinformatics/btv145 · 2015 · External reference
Activating transcription factor 3 is a potential target and a new biomarker for the prognosis of atherosclerosis
10.1007/s13577-020-00432-9 · 2021 · External reference
A bioinformatics perspective on the links between tetraspanin-enriched microdomains and cardiovascular pathophysiology
2021 · External reference
Endothelial ZEB1 promotes angiogenesis-dependent bone formation and reverses osteoporosis
10.1038/s41467-019-14076-3 · 2020 · External reference
Xyloketal B exerts antihypertensive effect in renovascular hypertensive rats via the NO-sGC-cGMP pathway and calcium signaling
10.1038/aps.2018.12 · 2018 · External reference
Deletion of BACH1 attenuates atherosclerosis by reducing endothelial inflammation
10.1161/circresaha.121.319540 · 2022 · External reference
ATF3 promotes the serine synthesis pathway and tumor growth under dietary serine restriction
2021 · External reference
GEPIA2021: integrating multiple deconvolution-based analysis into GEPIA
10.1093/nar/gkab418 · 2021 · External reference
A narrative review of research progress on FoxM1 in breast cancer carcinogenesis and therapeutics
10.21037/atm-21-5271 · 2021 · External reference
FOXM1 facilitates breast cancer cell stemness and migration in YAP1-dependent manner
2020 · External reference
10.1016/j.molcel.2015.02.014
10.1016/j.molcel.2015.02.014 · External reference
Paired box 5 is a novel marker of breast cancers that is frequently downregulated by methylation
10.7150/ijbs.27599 · 2018 · External reference
10.1016/j.cell.2013.02.014
10.1016/j.cell.2013.02.014 · External reference
10.1126/science.1222794
10.1126/science.1222794 · External reference
10.1038/nrg2918
10.1038/nrg2918 · External reference
