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References from scBlood: A comprehensive single-cell accessible chromatin database of blood cells. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/s41556-021-00690-1
10.1038/s41556-021-00690-1 · External reference
The independent prognostic value of global epigenetic alterations: An analysis of single-cell ATAC-seq of circulating leukocytes from trauma patients followed by validation in whole blood leukocyte transcriptomes across three etiologies of critical illness
10.1016/j.ebiom.2022.103860 · 2022 · External reference
10.1016/j.immuni.2018.03.024
10.1016/j.immuni.2018.03.024 · External reference
10.1016/j.stem.2020.11.015
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10.1016/s2152-2650(23)01590-2
10.1016/s2152-2650(23)01590-2 · External reference
A Comprehensive Analysis of Single-Cell Chromatin Accessibility and Gene Expression Identifies Intra-Tumor Heterogeneity and Molecular Treatment Responses in Relapsed/Refractory Multiple Myeloma
10.1182/blood-2019-130051 · 2019 · External reference
10.1182/bloodadvances.2020002992
10.1182/bloodadvances.2020002992 · External reference
Chromatin accessibility analysis reveals regulatory dynamics and therapeutic relevance of Vogt-Koyanagi-Harada disease
10.1038/s42003-022-03430-9 · 2022 · External reference
10.1038/s41422-022-00719-6
10.1038/s41422-022-00719-6 · External reference
10.1038/nature14590
10.1038/nature14590 · External reference
An epigenome atlas of neural progenitors within the embryonic mouse forebrain
10.1038/s41467-022-31793-4 · 2022 · External reference
10.1038/s41587-021-00927-2
10.1038/s41587-021-00927-2 · External reference
10.1016/j.immuni.2022.02.004
10.1016/j.immuni.2022.02.004 · External reference
Single-cell chromatin profiling of the primitive gut tube reveals regulatory dynamics underlying lineage fate decisions
10.1038/s41467-022-30624-w · 2022 · External reference
DIRECT-NET: An efficient method to discover cis-regulatory elements and construct regulatory networks from single-cell multiomics data
2022 · External reference
10.1038/s41587-019-0206-z
10.1038/s41587-019-0206-z · External reference
10.1038/ng.3646
10.1038/ng.3646 · External reference
10.1038/s43018-022-00391-0
10.1038/s43018-022-00391-0 · External reference
Single cell regulatory landscape of the mouse kidney highlights cellular differentiation programs and disease targets
10.1038/s41467-021-22266-1 · 2021 · External reference
Single-cell chromatin accessibility landscape in kidney identifies additional cell-of-origin in heterogenous papillary renal cell carcinoma
10.1038/s41467-021-27660-3 · 2022 · External reference
scBasset: sequence-based modeling of single-cell ATAC-seq using convolutional neural networks
10.1038/s41592-022-01562-8 · 2022 · External reference
10.1016/j.cell.2021.05.039
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10.1038/s41586-021-03209-8
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10.1038/s41375-022-01676-0
10.1038/s41375-022-01676-0 · External reference
BloodSpot 3.0: a database of gene and protein expression data in normal and malignant haematopoiesis
2023 · External reference
10.1093/nar/gkv1101
10.1093/nar/gkv1101 · External reference
10.1093/nar/gky1076
10.1093/nar/gky1076 · External reference
10.1093/nar/gkac646
10.1093/nar/gkac646 · External reference
10.1016/j.cell.2021.10.024
10.1016/j.cell.2021.10.024 · External reference
A comparative atlas of single-cell chromatin accessibility in the human brain
2023 · External reference
HTCA: a database with an in-depth characterization of the single-cell human transcriptome
2023 · External reference
AgeAnno: a knowledgebase of single-cell annotation of aging in human
10.1093/nar/gkac847 · 2023 · External reference
scEnhancer: a single-cell enhancer resource with annotation across hundreds of tissue/cell types in three species
2022 · External reference
10.1016/j.cell.2018.06.052
10.1016/j.cell.2018.06.052 · External reference
A human cell atlas of fetal chromatin accessibility
10.1126/science.aba7612 · 2020 · External reference
10.1016/j.molcel.2018.06.044
10.1016/j.molcel.2018.06.044 · External reference
10.1038/nmeth.4401
10.1038/nmeth.4401 · External reference
Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Peripheral Mononuclear Cells in Patients With Ankylosing Spondylitis
2021 · External reference
NCBI GEO: archive for functional genomics data sets--update
10.1093/nar/gks1193 · 2013 · External reference
The Sequence Read Archive: a decade more of explosive growth
10.1093/nar/gkab1053 · 2022 · External reference
scATAC-pro: a comprehensive workbench for single-cell chromatin accessibility sequencing data
10.1186/s13059-020-02008-0 · 2020 · External reference
Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads
10.7554/elife.73971 · 2022 · External reference
10.1126/science.aab1601
10.1126/science.aab1601 · External reference
10.1038/nature25981
10.1038/nature25981 · External reference
10.1038/nbt.3192
10.1038/nbt.3192 · External reference
10.1038/nbt.4314
10.1038/nbt.4314 · External reference
clusterProfiler 4.0: A universal enrichment tool for interpreting omics data
2021 · External reference
10.1093/nar/gky1055
10.1093/nar/gky1055 · External reference
KEGG: new perspectives on genomes, pathways, diseases and drugs
10.1093/nar/gkw1092 · 2017 · External reference
10.1038/s41588-018-0156-2
10.1038/s41588-018-0156-2 · External reference
10.1038/s41593-018-0079-3
10.1038/s41593-018-0079-3 · External reference
10.1038/s41590-018-0276-y
10.1038/s41590-018-0276-y · External reference
SCINA: A Semi-Supervised Subtyping Algorithm of Single Cells and Bulk Samples
10.3390/genes10070531 · 2019 · External reference
CellMarker 2.0: an updated database of manually curated cell markers in human/mouse and web tools based on scRNA-seq data
2023 · External reference
10.1038/s41592-019-0619-0
10.1038/s41592-019-0619-0 · External reference
Pathogenic Role of Immune Cells in Rheumatoid Arthritis: Implications in Clinical Treatment and Biomarker Development
2018 · External reference
10.1038/s41590-019-0378-1
10.1038/s41590-019-0378-1 · External reference
10.1093/intimm/dxx016
10.1093/intimm/dxx016 · External reference
2014 Jeffrey M. Hoeg Award Lecture: Transcriptional Control of Monocyte Development
10.1161/atvbaha.116.304054 · 2016 · External reference
C/EBPepsilon directs granulocytic-vs-monocytic lineage determination and confers chemotactic function via Hlx.
10.1016/j.exphem.2009.11.004 · 2010 · External reference
Interleukin-6 receptor inhibition with tocilizumab reduces disease activity in rheumatoid arthritis with inadequate response to disease-modifying antirheumatic drugs: the tocilizumab in combination with traditional disease-modifying antirheumatic drug therapy study
10.1002/art.23940 · 2008 · External reference
10.1073/pnas.232432399
10.1073/pnas.232432399 · External reference
Interleukin-6 in Rheumatoid Arthritis
10.3390/ijms21155238 · 2020 · External reference