Research graph
References from PRIMITI: A computational approach for accurate prediction of miRNA-target mRNA interaction. Local targets link to admitted publications; unresolved targets remain external evidence.
Non-coding RNAs: classification, biology and functioning
10.1007/978-3-319-42059-2_1 · 2016 · External reference
10.1038/s41580-018-0045-7
10.1038/s41580-018-0045-7 · External reference
Overview of MicroRNA biogenesis, mechanisms of actions, and circulation
10.3389/fendo.2018.00402 · 2018 · External reference
10.1038/ng.3694
10.1038/ng.3694 · External reference
10.1101/gr.082701.108
10.1101/gr.082701.108 · External reference
The role of MicroRNAs in human cancer
10.1038/sigtrans.2015.4 · 2016 · External reference
MicroRNAs in cardiovascular disease: an introduction for clinicians
10.1136/heartjnl-2013-305402 · 2015 · External reference
microRNA dysregulation in neurodegenerative diseases: a systematic review
10.1016/j.pneurobio.2019.101664 · 2019 · External reference
The potential for microRNA therapeutics and clinical research
10.3389/fgene.2019.00478 · 2019 · External reference
10.1093/nar/gkt852
10.1093/nar/gkt852 · External reference
10.1128/mcb.02005-06
10.1128/mcb.02005-06 · External reference
Prediction of functional microRNA targets by integrative modeling of microRNA binding and target expression data
10.1186/s13059-019-1629-z · 2019 · External reference
10.1016/j.neuron.2013.10.062
10.1016/j.neuron.2013.10.062 · External reference
10.1016/j.cell.2013.03.043
10.1016/j.cell.2013.03.043 · External reference
10.1016/j.molcel.2014.03.049
10.1016/j.molcel.2014.03.049 · External reference
Cross-linking ligation and sequencing of hybrids (qCLASH) reveals an unpredicted miRNA targetome in melanoma cells
10.3390/cancers13051096 · 2021 · External reference
10.1016/j.csbj.2021.10.025
10.1016/j.csbj.2021.10.025 · External reference
Survey of computational algorithms for MicroRNA target prediction
10.2174/138920209789208219 · 2009 · External reference
Human MicroRNA targets
10.1371/journal.pbio.0020363 · 2004 · External reference
MicroRNA targets in Drosophila
10.1186/gb-2003-5-1-r1 · 2003 · External reference
10.1016/j.cell.2006.07.031
10.1016/j.cell.2006.07.031 · External reference
The role of site accessibility in microRNA target recognition
10.1038/ng2135 · 2007 · External reference
DIANA-microT web server v5.0: service integration into miRNA functional analysis workflows
10.1093/nar/gkt393 · 2013 · External reference
10.7554/elife.05005
10.7554/elife.05005 · External reference
miRDB: an online database for prediction of functional microRNA targets
10.1093/nar/gkz757 · 2020 · External reference
CLIP and complementary methods
10.1038/s43586-021-00018-1 · 2021 · External reference
iLearn: an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data
10.1093/bib/bbz041 · 2020 · External reference
iFeature: a Python package and web server for features extraction and selection from protein and peptide sequences
10.1093/bioinformatics/bty140 · 2018 · External reference
MSLP: mRNA subcellular localization predictor based on machine learning techniques
10.1186/s12859-023-05232-0 · 2023 · External reference
MP-VHPPI: Meta predictor for viral host protein-protein interaction prediction in multiple hosts and viruses
10.3389/fmed.2022.1025887 · 2022 · External reference
10.1038/nrg1521
10.1038/nrg1521 · External reference
SNPs in microRNA target sites and their potential role in human disease
10.1098/rsob.170019 · 2017 · External reference
10.1016/b978-1-55860-335-6.50023-4
10.1016/b978-1-55860-335-6.50023-4 · External reference
miRTarBase 2020: updates to the experimentally validated microRNA-target interaction database
2020 · External reference
DIANA-TarBase v8: a decade-long collection of experimentally supported miRNA-gene interactions
10.1093/nar/gkx1141 · 2018 · External reference
Imbalanced-learn: a python toolbox to tackle the curse of imbalanced datasets in machine learning
2017 · External reference
The biochemical basis of microRNA targeting efficacy
10.1126/science.aav1741 · 2019 · External reference
10.1016/j.molcel.2007.06.017
10.1016/j.molcel.2007.06.017 · External reference
Beyond the seed: structural basis for supplementary microRNA targeting by human Argonaute2
10.15252/embj.2018101153 · 2019 · External reference
10.1126/science.1258040
10.1126/science.1258040 · External reference
10.1016/j.cell.2012.10.036
10.1016/j.cell.2012.10.036 · External reference
Unresolved reference
External reference
Unresolved reference
2016 · External reference
mycoCSM: using graph-based signatures to identify safe potent hits against mycobacteria
10.1021/acs.jcim.0c00362 · 2020 · External reference
mmCSM-NA: accurately predicting effects of single and multiple mutations on protein-nucleic acid binding affinity
2021 · External reference
MicroRNA-199b-3p suppresses malignant proliferation by targeting Phospholipase Cepsilon and correlated with poor prognosis in prostate cancer.
10.1016/j.bbrc.2021.08.078 · 2021 · External reference
The inhibition of the highly expressed miR-221 and miR-222 impairs the growth of prostate carcinoma xenografts in mice
10.1371/journal.pone.0004029 · 2008 · External reference
miR-21-5p, miR-141-3p, and miR-205-5p levels in urine-promising biomarkers for the identification of prostate and bladder cancer
10.1002/pros.23714 · 2019 · External reference
Unresolved reference
2016 · External reference
Unresolved reference
2017 · External reference
IntaRNA 2.0: enhanced and customizable prediction of RNA-RNA interactions
10.1093/nar/gkx279 · 2017 · External reference
miRNASNP-v3: a comprehensive database for SNPs and disease-related variations in miRNAs and miRNA targets
10.1093/nar/gkaa783 · 2021 · External reference
An estimate of the total number of true human miRNAs
10.1093/nar/gkz097 · 2019 · External reference
Informative RNA base embedding for RNA structural alignment and clustering by deep representation learning
2022 · External reference
