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References from Methylation and transcriptomic profiling reveals short term and long term regulatory responses in polarized macrophages. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nature12034
10.1038/nature12034 · External reference
10.1146/annurev-pathmechdis-012418-012718
10.1146/annurev-pathmechdis-012418-012718 · External reference
10.1146/annurev-physiol-022516-034339
10.1146/annurev-physiol-022516-034339 · External reference
10.1038/nri3073
10.1038/nri3073 · External reference
Carbon nanomaterials promote M1/M2 macrophage activation
10.1002/smll.201907609 · 2020 · External reference
10.1038/nri3088
10.1038/nri3088 · External reference
Trajectory analysis quantifies transcriptional plasticity during macrophage polarization
10.1038/s41598-020-68766-w · 2020 · External reference
Irf1- and Egr1-activated transcription plays a key role in macrophage polarization: a multiomics sequencing study with partial validation
10.1016/j.intimp.2021.108072 · 2021 · External reference
10.1002/eji.201141792
10.1002/eji.201141792 · External reference
10.1182/blood-2009-04-217620
10.1182/blood-2009-04-217620 · External reference
10.1016/j.it.2012.11.001
10.1016/j.it.2012.11.001 · External reference
10.1210/me.2013-1293
10.1210/me.2013-1293 · External reference
10.1101/gad.947102
10.1101/gad.947102 · External reference
Unresolved reference
External reference
An ancestral molecular response to nanomaterial particulates
2023 · External reference
10.1093/nar/gkt499
10.1093/nar/gkt499 · External reference
Toxicogenomics analysis of dynamic dose-response in macrophages highlights molecular alterations relevant for multi-walled carbon nanotube-induced lung fibrosis
10.1016/j.impact.2020.100274 · 2020 · External reference
10.1038/s41577-020-0285-6
10.1038/s41577-020-0285-6 · External reference
10.1016/j.cell.2016.09.034
10.1016/j.cell.2016.09.034 · External reference
Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity
10.1126/science.1251086 · 2014 · External reference
Unresolved reference
External reference
Multi-omics approaches in immunological research
10.3389/fimmu.2021.668045 · 2021 · External reference
10.1002/eji.202048882
10.1002/eji.202048882 · External reference
Multi-walled carbon nanotubes elicit concordant changes in DNA methylation and gene expression following long-term pulmonary exposure in mice
10.1016/j.carbon.2021.03.045 · 2021 · External reference
10.1371/journal.pone.0208602
10.1371/journal.pone.0208602 · External reference
An epigenetic and transcriptomic signature of immune tolerance in human monocytes through multi-omics integration
10.1186/s13073-021-00948-1 · 2021 · External reference
10.3389/fimmu.2014.00603
10.3389/fimmu.2014.00603 · External reference
10.1126/science.aaf1098
10.1126/science.aaf1098 · External reference
10.1016/j.cmet.2016.10.008
10.1016/j.cmet.2016.10.008 · External reference
10.1016/j.cell.2017.11.025
10.1016/j.cell.2017.11.025 · External reference
10.1038/nature25986
10.1038/nature25986 · External reference
10.1186/s12885-015-1546-9
10.1186/s12885-015-1546-9 · External reference
Convenience versus biological significance: are PMA-Differentiated THP-1 cells a reliable substitute for blood-derived macrophages when studying in vitro polarization?
10.3389/fphar.2018.00071 · 2018 · External reference
10.3389/fimmu.2019.01858
10.3389/fimmu.2019.01858 · External reference
10.1186/s13059-014-0550-8
10.1186/s13059-014-0550-8 · External reference
10.12688/f1000research.8839.3
10.12688/f1000research.8839.3 · External reference
10.1093/bioinformatics/btu049
10.1093/bioinformatics/btu049 · External reference
10.1007/0-387-29362-0_23
10.1007/0-387-29362-0_23 · 2005 · External reference
10.1186/s12864-019-5761-7
10.1186/s12864-019-5761-7 · External reference
10.1038/nbt.1630
10.1038/nbt.1630 · External reference
10.1093/nar/gkad347
10.1093/nar/gkad347 · External reference
10.1371/journal.pone.0145342
10.1371/journal.pone.0145342 · External reference
10.4049/jimmunol.177.10.7303
10.4049/jimmunol.177.10.7303 · External reference
10.3389/fcvm.2022.868788
10.3389/fcvm.2022.868788 · External reference
10.1038/s41580-019-0159-6
10.1038/s41580-019-0159-6 · External reference
10.1016/j.tig.2014.04.004
10.1016/j.tig.2014.04.004 · External reference
10.1016/j.molcel.2020.01.004
10.1016/j.molcel.2020.01.004 · External reference
10.1007/s13237-021-00367-y
10.1007/s13237-021-00367-y · External reference
10.1126/science.aaj2239
10.1126/science.aaj2239 · External reference
10.1038/nature16462
10.1038/nature16462 · External reference
10.1002/jcp.21224
10.1002/jcp.21224 · External reference
10.1038/nature14192
10.1038/nature14192 · External reference
10.1371/journal.pgen.1000032
10.1371/journal.pgen.1000032 · External reference
10.1038/bjc.2011.550
10.1038/bjc.2011.550 · External reference
10.1016/j.cell.2018.01.029
10.1016/j.cell.2018.01.029 · External reference
10.1038/nature12433
10.1038/nature12433 · External reference
10.3389/fcell.2019.00114
10.3389/fcell.2019.00114 · External reference
10.1038/s41586-020-2229-5
10.1038/s41586-020-2229-5 · External reference
10.1016/j.molcel.2009.04.026
10.1016/j.molcel.2009.04.026 · External reference
10.1002/jcp.30529
10.1002/jcp.30529 · External reference
The roles of tissue resident macrophages in health and cancer
10.1186/s40164-023-00469-0 · 2024 · External reference
10.1016/j.imbio.2011.01.001
10.1016/j.imbio.2011.01.001 · External reference
10.1136/jitc-2020-001341
10.1136/jitc-2020-001341 · External reference
10.1016/j.molcel.2022.02.018
10.1016/j.molcel.2022.02.018 · External reference
10.3389/fimmu.2019.01462
10.3389/fimmu.2019.01462 · External reference
10.3389/fimmu.2022.840029
10.3389/fimmu.2022.840029 · External reference
10.1016/j.immuni.2015.02.005
10.1016/j.immuni.2015.02.005 · External reference
10.1016/j.cmet.2011.11.013
10.1016/j.cmet.2011.11.013 · External reference
10.1172/jci147719
10.1172/jci147719 · External reference
10.1038/s41590-020-00845-6
10.1038/s41590-020-00845-6 · External reference
10.1016/j.immuni.2020.10.011
10.1016/j.immuni.2020.10.011 · External reference
BCG-induced trained immunity: history, mechanisms and potential applications
10.1186/s12967-023-03944-8 · 2023 · External reference
SOCS1 hypermethylation mediated by DNMT1 is associated with lipopolysaccharide-induced inflammatory cytokines in macrophages
10.1016/j.toxlet.2013.12.023 · 2014 · External reference
Macrophages in immunoregulation and therapeutics
2023 · External reference
10.3390/cells9092040
10.3390/cells9092040 · External reference
10.1016/j.celrep.2022.111462
10.1016/j.celrep.2022.111462 · External reference
LncRNA MALAT1 regulates inflammatory cytokine production in lipopolysaccharide-stimulated human gingival fibroblasts through sponging miR-20a and activating TLR4 pathway
10.1111/jre.12700 · 2020 · External reference
10.1038/nature20149
10.1038/nature20149 · External reference
10.3389/fimmu.2018.03184
10.3389/fimmu.2018.03184 · External reference
10.3389/fcell.2019.00002
10.3389/fcell.2019.00002 · External reference
10.1126/science.1250684
10.1126/science.1250684 · External reference
10.1038/nature11986
10.1038/nature11986 · External reference
10.3389/fimmu.2023.1180488
10.3389/fimmu.2023.1180488 · External reference
10.1016/j.immuni.2019.11.009
10.1016/j.immuni.2019.11.009 · External reference
10.18632/oncotarget.14558
10.18632/oncotarget.14558 · External reference
10.1002/2211-5463.13388
10.1002/2211-5463.13388 · External reference
10.1111/cmi.12824
10.1111/cmi.12824 · External reference
10.1016/j.cell.2011.02.015
10.1016/j.cell.2011.02.015 · External reference
The problem of apoptotic processes reversibility
10.1134/s000629792010003x · 2020 · External reference
10.1016/j.bpj.2012.03.052
10.1016/j.bpj.2012.03.052 · External reference
Single-cell transcriptomics of a dynamic cell behavior in murine airways. Choi M, Zaidi M, Choi M, Nawijn M, editors
10.7554/elife.76645 · 2023 · External reference
10.1038/s41467-019-09709-6
10.1038/s41467-019-09709-6 · External reference
NF-κB signaling in inflammation
2017 · External reference
10.3390/ijms21218087
10.3390/ijms21218087 · External reference
10.1016/j.coi.2018.05.013
10.1016/j.coi.2018.05.013 · External reference
