Research graph
References from Predicting protein complexes in protein interaction networks using Mapper and graph convolution networks. Local targets link to admitted publications; unresolved targets remain external evidence.
Unresolved reference
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10.1073/pnas.2032324100
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2012 · External reference
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10.3390/molecules16064408 · External reference
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Ncmine: core-peripheral based functional module detection using near-clique mining
10.1093/bioinformatics/btw488 · 2016 · External reference
A core-attachment based method to detect protein complexes in ppi networks
10.1186/1471-2105-10-169 · 2009 · External reference
An automated method for finding molecular complexes in large protein interaction networks
10.1186/1471-2105-4-2 · 2003 · External reference
Development and implementation of an algorithm for detection of protein complexes in large interaction networks
10.1186/1471-2105-7-207 · 2006 · External reference
10.1093/bioinformatics/btp311
10.1093/bioinformatics/btp311 · External reference
Protein complex prediction in large ontology attributed protein-protein interaction networks
10.1109/tcbb.2013.86 · 2013 · External reference
Cfinder: locating cliques and overlapping modules in biological networks
2006 · External reference
Identifying protein complexes in protein-protein interaction data using graph convolutional network
10.1109/access.2021.3110845 · 2022 · External reference
10.1002/pmic.201200277
10.1002/pmic.201200277 · External reference
A method for predicting protein complex in dynamic ppi networks
2016 · External reference
A novel temporal protein complexes identification framework based on density–distance and heuristic algorithm
2019 · External reference
Cpredictor3.0: detecting protein complexes from ppi networks with expression data and functional annotations
2017 · External reference
Unresolved reference
2019 · External reference
10.1109/topoinvis60193.2023.00008
10.1109/topoinvis60193.2023.00008 · External reference
Deep graph mapper: seeing graphs through the neural lens
10.3389/fdata.2021.680535 · 2021 · External reference
10.1038/nature04532
10.1038/nature04532 · External reference
10.1038/nature04670
10.1038/nature04670 · External reference
Mpact: the mips protein interaction resource on yeast
10.1093/nar/gkj003 · 2006 · External reference
String v9.1: protein-protein interaction networks, with increased coverage and integration
10.1093/nar/gks1094 · 2012 · External reference
10.1126/science.1120499
10.1126/science.1120499 · External reference
10.1007/978-1-4939-3578-9_5
10.1007/978-1-4939-3578-9_5 · External reference
Construction of dynamic protein interaction network based on gene expression data and quartile one principle
10.1002/prot.26304 · 2022 · External reference
msidbn: a method of identifying critical proteins in dynamic ppi networks
2014 · External reference
The topology of data: opportunities for cancer research
10.1093/bioinformatics/btab553 · 2021 · External reference
Unresolved reference
2016 · External reference
Umap: uniform manifold approximation and projection for dimension reduction
10.21105/joss.00861 · 2018 · External reference
Near linear time algorithm to detect community structures in large-scale networks
10.1103/physreve.76.036106 · 2007 · External reference
Detecting protein complexes in protein interaction networks using a ranking algorithm with a refined merging procedure
10.1186/1471-2105-15-204 · 2014 · External reference
10.1093/nar/gkn1005
10.1093/nar/gkn1005 · External reference
Complex portal 2022: new curation frontiers
10.1093/nar/gkab991 · 2021 · External reference
Computational approaches for detecting protein complexes from protein interaction networks: a survey
10.1186/1471-2164-11-s1-s3 · 2010 · External reference
Using indirect protein-protein interactions in protein complex prediction
10.1142/9781860948732_0014 · 2007 · External reference
Evaluation of clustering algorithms for protein interaction networks
10.1186/1471-2105-7-488 · 2006 · External reference
10.1093/bioinformatics/bth456
10.1093/bioinformatics/bth456 · External reference
