Research graph
References from IGN: Invariable gene set-based normalization for chromatin accessibility profile data analysis. Local targets link to admitted publications; unresolved targets remain external evidence.
DNase I hypersensitive sites in Drosophila chromatin occur at the 5′ ends of regions of transcription
10.1073/pnas.78.1.143 · 1981 · External reference
A 200 base pair region at the 5′ end of the chicken adult beta-globin gene is accessible to nuclease digestion
10.1016/0092-8674(81)90359-7 · 1981 · External reference
10.1016/j.cell.2007.12.014
10.1016/j.cell.2007.12.014 · External reference
10.1038/nmeth.2688
10.1038/nmeth.2688 · External reference
Tcf1 preprograms the mobilization of glycolysis in central memory CD8
10.1038/s41590-022-01131-3 · 2022 · External reference
10.1101/gr.133280.111
10.1101/gr.133280.111 · External reference
10.1016/j.cell.2016.05.050
10.1016/j.cell.2016.05.050 · External reference
Intrinsic bias estimation for improved analysis of bulk and single-cell chromatin accessibility profiles using SELMA
10.1038/s41467-022-33194-z · 2022 · External reference
10.1186/s13059-014-0550-8
10.1186/s13059-014-0550-8 · External reference
10.1093/bioinformatics/btp616
10.1093/bioinformatics/btp616 · External reference
10.1101/gr.232488.117
10.1101/gr.232488.117 · External reference
Transcription restart establishes chromatin accessibility after DNA replication
10.1016/j.molcel.2019.06.035 · 2019 · External reference
Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application
2001 · External reference
Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects
10.1093/nar/29.12.2549 · 2001 · External reference
10.1038/nmeth.1923
10.1038/nmeth.1923 · External reference
10.1186/gb-2008-9-9-r137
10.1186/gb-2008-9-9-r137 · External reference
10.1038/nmeth.3317
10.1038/nmeth.3317 · External reference
10.1038/nprot.2016.095
10.1038/nprot.2016.095 · External reference
10.1093/bioinformatics/bty895
10.1093/bioinformatics/bty895 · External reference
10.1101/gr.262675.120
10.1101/gr.262675.120 · External reference
Defining memory CD8 T cell
10.3389/fimmu.2018.02692 · 2018 · External reference
10.1146/annurev.immunol.25.022106.141548
10.1146/annurev.immunol.25.022106.141548 · External reference
10.1186/gb-2010-11-10-r106
10.1186/gb-2010-11-10-r106 · External reference
10.1186/gb-2010-11-3-r25
10.1186/gb-2010-11-3-r25 · External reference
Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments
10.1186/1471-2105-11-94 · 2010 · External reference
