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References from Identifying associations between short tandem repeat sequences and gene expression in yeast reveals specific repeated motifs encoding transcriptional regulatory proteins. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1534/genetics.110.124180
10.1534/genetics.110.124180 · External reference
10.1038/nrg2814
10.1038/nrg2814 · External reference
10.1016/j.cell.2018.08.005
10.1016/j.cell.2018.08.005 · External reference
Repetitive DNA sequence detection and its role in the human genome
2023 · External reference
10.1038/s43018-020-00114-3
10.1038/s43018-020-00114-3 · External reference
10.1016/j.gpb.2014.07.003
10.1016/j.gpb.2014.07.003 · External reference
Unresolved reference
External reference
Short tandem repeats bind transcription factors to tune eukaryotic gene expression
10.1126/science.add1250 · 2023 · External reference
10.1038/nrg2748
10.1038/nrg2748 · External reference
Mechanisms of trinucleotide repeat instability during human development
2010 · External reference
10.1038/nature05977
10.1038/nature05977 · External reference
10.1038/nrg1689
10.1038/nrg1689 · External reference
Cellular checkpoint control using programmable sequential logic
10.1126/science.aap8987 · 2018 · External reference
10.1126/science.aad2081
10.1126/science.aad2081 · External reference
10.1126/science.1170097
10.1126/science.1170097 · External reference
10.1002/j.1460-2075.1995.tb07255.x
10.1002/j.1460-2075.1995.tb07255.x · External reference
Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloe festucae
10.1371/journal.pgen.1007467 · 2018 · External reference
Epigenetic control of effector gene expression in the plant pathogenic fungus leptosphaeria maculans
10.1371/journal.pgen.1004227 · 2014 · External reference
10.1016/j.cell.2022.06.052
10.1016/j.cell.2022.06.052 · External reference
The impact of short tandem repeat variation on gene expression
10.1038/s41588-019-0521-9 · 2019 · External reference
10.1101/gr.070409.107
10.1101/gr.070409.107 · External reference
The tandem repeats enabling reversible switching between the two phases of β-lactamase substrate spectrum
2014 · External reference
An atlas of genetic correlations across human diseases and traits
10.1038/ng.3406 · 2015 · External reference
Effect of tandem repeats adjacent to 3′-terminal of FLO1 on the flocculation function of Saccharomyces cerevisiae
2013 · External reference
10.1038/ng1618
10.1038/ng1618 · External reference
10.1002/advs.202304848
10.1002/advs.202304848 · External reference
10.1093/nar/27.2.573
10.1093/nar/27.2.573 · External reference
HiC-Pro: an optimized and flexible pipeline for Hi-C data processing
10.1186/s13059-015-0831-x · 2015 · External reference
10.1093/bioinformatics/btp324
10.1093/bioinformatics/btp324 · External reference
Pairtools: from sequencing data to chromosome contacts
2024 · External reference
10.1093/bioinformatics/btp352
10.1093/bioinformatics/btp352 · External reference
10.1038/nmeth.1923
10.1038/nmeth.1923 · External reference
10.1093/bioinformatics/btv098
10.1093/bioinformatics/btv098 · External reference
10.1093/nar/gku365
10.1093/nar/gku365 · External reference
10.5808/gi.2020.18.4.e42
10.5808/gi.2020.18.4.e42 · External reference
10.1093/bioinformatics/bts635
10.1093/bioinformatics/bts635 · External reference
RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
2011 · External reference
10.1038/s41596-019-0273-0
10.1038/s41596-019-0273-0 · External reference
RCircos: an R package for Circos 2D track plots
10.1186/1471-2105-14-244 · 2013 · External reference
10.1016/j.celrep.2016.10.061
10.1016/j.celrep.2016.10.061 · External reference
Dissection of 3D chromosome organization in Streptomyces coelicolor A3(2) leads to biosynthetic gene cluster overexpression
10.1073/pnas.2222045120 · 2023 · External reference
10.1089/omi.2011.0118
10.1089/omi.2011.0118 · External reference
FAN-C: a feature-rich framework for the analysis and visualisation of chromosome conformation capture data
10.1186/s13059-020-02215-9 · 2020 · External reference
3D organization of synthetic and scrambled chromosomes
10.1126/science.aaf4597 · 2017 · External reference
10.1126/science.aaf4557
10.1126/science.aaf4557 · External reference
10.1016/j.synbio.2022.04.003
10.1016/j.synbio.2022.04.003 · External reference
Dynamics of synthetic yeast chromosome evolution shaped by hierarchical chromatin organization
10.1093/nsr/nwad073 · 2023 · External reference
10.1038/35057062
10.1038/35057062 · External reference
Genome-wide detection of segmental duplications and potential assembly errors in the human genome sequence
10.1186/gb-2003-4-4-r25 · 2003 · External reference
Sequence, chromatin and evolution of satellite DNA
10.3390/ijms22094309 · 2021 · External reference
Convergent genes shape budding yeast pericentromeres
10.1038/s41586-020-2244-6 · 2020 · External reference
10.1093/nar/gkr757
10.1093/nar/gkr757 · External reference
Statistical genomics analysis of simple sequence repeats from the paphiopedilum malipoense transcriptome reveals control knob motifs modulating gene expression
10.1002/advs.202470141 · 2024 · External reference
Genomic repeats categorize genes with distinct functions for orchestrated regulation
2020 · External reference
Analysis of genomic sequence motifs for deciphering transcription factor binding and transcriptional regulation in eukaryotic cells
10.3389/fgene.2016.00024 · 2016 · External reference
10.1038/nrg.2017.115
10.1038/nrg.2017.115 · External reference
10.1126/science.1112178
10.1126/science.1112178 · External reference
10.1146/annurev.genet.34.1.77
10.1146/annurev.genet.34.1.77 · External reference
10.1101/gad.11.24.3432
10.1101/gad.11.24.3432 · External reference
10.1074/jbc.273.37.23641
10.1074/jbc.273.37.23641 · External reference
A high resolution protein interaction map of the yeast Mediator complex
10.1093/nar/gkh878 · 2004 · External reference
10.1038/nrm3920
10.1038/nrm3920 · External reference
Flexible nets - the roles of intrinsic disorder in protein interaction networks
10.1111/j.1742-4658.2005.04948.x · 2005 · External reference
The role of disorder in interaction networks: a structural analysis
2008 · External reference
10.1016/s0022-2836(02)00969-5
10.1016/s0022-2836(02)00969-5 · External reference
10.1021/bi0602718
10.1021/bi0602718 · External reference
10.1021/bi8006803
10.1021/bi8006803 · External reference
A foundation model of transcription across human cell types
2025 · External reference
10.1016/j.cels.2022.11.005
10.1016/j.cels.2022.11.005 · External reference
Unresolved reference
2019 · External reference
10.1016/j.molcel.2015.02.002
10.1016/j.molcel.2015.02.002 · External reference
10.1038/s41594-019-0273-3
10.1038/s41594-019-0273-3 · External reference
Dissection of 3D chromosome organization in Streptomyces coelicolor A3(2) leads to biosynthetic gene cluster overexpression
10.1073/pnas.2222045120 · 2023 · External reference
Multiscale structuring of the E. coli chromosome by nucleoid-associated and condensin proteins
2018 · External reference
10.1038/nature08973
10.1038/nature08973 · External reference
10.1016/j.cell.2015.05.048
10.1016/j.cell.2015.05.048 · External reference
10.1038/s41587-024-02320-1
10.1038/s41587-024-02320-1 · External reference