Research graph
References from AttnW2V-Enhancer: Leveraging attention and Word2Vec for enhanced enhancer prediction. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nrg3458
10.1038/nrg3458 · External reference
10.1016/j.ijbiomac.2024.130579
10.1016/j.ijbiomac.2024.130579 · External reference
Enhancer prediction in proboscis monkey genome: a comparative study
2017 · External reference
10.1016/j.molcel.2019.07.009
10.1016/j.molcel.2019.07.009 · External reference
10.1146/annurev.genom.7.080505.115623
10.1146/annurev.genom.7.080505.115623 · External reference
10.1016/j.molcel.2014.06.015
10.1016/j.molcel.2014.06.015 · External reference
Characterization of the enhancer and promoter landscape of inflammatory bowel disease from human colon biopsies
10.1038/s41467-018-03766-z · 2018 · External reference
The roles of enhancer, especially super-enhancer-driven genes in tumor metabolism and immunity
10.1016/j.ijbiomac.2025.142414 · 2025 · External reference
10.3233/jad-170468
10.3233/jad-170468 · External reference
Noncoding rnas in sepsis-associated acute liver injury: roles, mechanisms, and therapeutic applications
10.1016/j.phrs.2025.107596 · 2025 · External reference
Mechanism of lncrna gm2044 in germ cell development
10.3389/fcell.2024.1410914 · 2024 · External reference
10.34133/research.0537
10.34133/research.0537 · External reference
10.1002/bies.201600106
10.1002/bies.201600106 · External reference
10.1093/nar/gkx920
10.1093/nar/gkx920 · External reference
High-throughput localization of functional elements by quantitative chromatin profiling
10.1038/nmeth721 · 2004 · External reference
10.1038/nmeth.2688
10.1038/nmeth.2688 · External reference
10.1101/gr.5533506
10.1101/gr.5533506 · External reference
10.1073/pnas.1016071107
10.1073/pnas.1016071107 · External reference
10.1038/nature07730
10.1038/nature07730 · External reference
10.1038/nature12787
10.1038/nature12787 · External reference
10.1016/j.cell.2016.09.018
10.1016/j.cell.2016.09.018 · External reference
10.1146/annurev-genom-082509-141651
10.1146/annurev-genom-082509-141651 · External reference
10.1038/nmeth.3329
10.1038/nmeth.3329 · External reference
Prediction of linear b-cell epitopes using amino acid pair antigenicity scale
10.1007/s00726-006-0485-9 · 2007 · External reference
Mrndr: multihead attention-based recommendation network for drug repurposing
10.1021/acs.jcim.3c01726 · 2024 · External reference
Classification of three anesthesia stages based on near-infrared spectroscopy signals
2024 · External reference
Genom7gnet: an efficient n 7-methylguanosine site prediction approach based on a nucleotide language model
2024 · External reference
Gccnet: a novel network leveraging gated cross-correlation for multi-view classification
2024 · External reference
Mvmrl: a multi-view molecular representation learning method for molecular property prediction
10.1093/bib/bbae298 · 2024 · External reference
T2td: text-3d generation model based on prior knowledge guidance
2024 · External reference
Deepbls: deep feature-based broad learning system for tissue phenotyping in colorectal cancer wsis
10.1007/s10278-023-00797-x · 2023 · External reference
Unresolved reference
2021 · External reference
A deniable encryption method for modulation-based dna storage
10.1007/s12539-024-00648-5 · 2024 · External reference
Attridiffuser: adversarially enhanced diffusion model for text-to-facial attribute image synthesis
10.1016/j.patcog.2025.111447 · 2025 · External reference
Cross-modal causal representation learning for radiology report generation
2025 · External reference
10.1038/s41467-024-55094-0
10.1038/s41467-024-55094-0 · External reference
A graph neural network approach for predicting drug susceptibility in the human microbiome
10.1016/j.compbiomed.2024.108729 · 2024 · External reference
Sb-net: synergizing cnn and lstm networks for uncovering retrosynthetic pathways in organic synthesis
10.1016/j.compbiolchem.2024.108130 · 2024 · External reference
Improving enhancer identification with a multi-classifier stacked ensemble model
10.1016/j.jmb.2023.168314 · 2023 · External reference
10.1093/bioinformatics/btq248
10.1093/bioinformatics/btq248 · External reference
10.1371/journal.pcbi.1002968
10.1371/journal.pcbi.1002968 · External reference
10.1371/journal.pcbi.1003677
10.1371/journal.pcbi.1003677 · External reference
A new method for enhancer prediction based on deep belief network
2017 · External reference
10.1093/bioinformatics/btv604
10.1093/bioinformatics/btv604 · External reference
Enhancerpred: a predictor for discovering enhancers based on the combination and selection of multiple features
10.1038/srep38741 · 2016 · External reference
Enhancerpred2. 0: predicting enhancers and their strength based on position-specific trinucleotide propensity and electron–ion interaction potential feature selection
10.1039/c7mb00054e · 2017 · External reference
10.1016/j.neucom.2015.12.138
10.1016/j.neucom.2015.12.138 · External reference
10.1093/bioinformatics/bty458
10.1093/bioinformatics/bty458 · External reference
10.3390/cells8070767
10.3390/cells8070767 · External reference
ienhancer-xg: interpretable sequence-based enhancers and their strength predictor
10.1093/bioinformatics/btaa914 · 2021 · External reference
ienhancer-mfgbdt: Identifying enhancers and their strength by fusing multiple features and gradient boosting decision tree
10.3934/mbe.2021434 · 2021 · External reference
ienhancer-kl: a novel two-layer predictor for identifying enhancers by position specific of nucleotide composition
10.1109/tcbb.2021.3053608 · 2021 · External reference
10.1016/j.ab.2019.02.017
10.1016/j.ab.2019.02.017 · External reference
10.1007/978-3-030-63836-8_4
10.1007/978-3-030-63836-8_4 · 2020 · External reference
10.3390/app12042120
10.3390/app12042120 · External reference
ienhancer-rd: identification of enhancers and their strength using rkpk features and deep neural networks
10.1016/j.ab.2021.114318 · 2021 · External reference
ienhancer-dcla: using the original sequence to identify enhancers and their strength based on a deep learning framework
10.1186/s12859-022-05033-x · 2022 · External reference
Unresolved reference
External reference
A transformer architecture based on bert and 2d convolutional neural network to identify dna enhancers from sequence information
10.1093/bib/bbab005 · 2021 · External reference
Enhanced rna secondary structure prediction through integrative deep learning and structural context analysis
10.1093/nar/gkaf533 · 2025 · External reference
Trapt: a multi-stage fused deep learning framework for predicting transcriptional regulators based on large-scale epigenomic data
10.1038/s41467-025-58921-0 · 2025 · External reference
Ori-explorer: a unified cell-specific tool for origin of replication sites prediction by feature fusion
10.1093/bioinformatics/btad664 · 2023 · External reference
ienhancer-ecnn: identifying enhancers and their strength using ensembles of convolutional neural networks
10.1186/s12864-019-6336-3 · 2019 · External reference
10.1109/access.2020.2982666
10.1109/access.2020.2982666 · External reference
ienhancer-eblstm: identifying enhancers and strengths by ensembles of bidirectional long short-term memory
10.3389/fgene.2021.665498 · 2021 · External reference
A deep learning framework for enhancer prediction using word embedding and sequence generation
10.1016/j.bpc.2022.106822 · 2022 · External reference
ienhancer-mrbf: identifying enhancers and their strength with a multiple Laplacian-regularized radial basis function network
10.1016/j.ymeth.2022.10.001 · 2022 · External reference
Unresolved reference
2022 · External reference
Enhancer-mdlf: a novel deep learning framework for identifying cell-specific enhancers
10.1093/bib/bbae083 · 2024 · External reference